Phragmites australis (common reed): 133899965
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Entry
133899965 CDS
T10575
Name
(RefSeq) ABC transporter B family member 21-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
paua Phragmites australis (common reed)
Pathway
paua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133899965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paua02000
]
133899965
04147 Exosome [BR:
paua04147
]
133899965
04090 CD molecules [BR:
paua04090
]
133899965
Enzymes [BR:
paua01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133899965
Transporters [BR:
paua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133899965
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133899965
CD molecules [BR:
paua04090
]
Proteins
133899965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
ABC_ATPase
RsgA_GTPase
AAA_21
AAA_30
Zeta_toxin
SbcC_Walker_B
DUF87
AAA_25
AAA_15
DUF815
Motif
Other DBs
NCBI-GeneID:
133899965
NCBI-ProteinID:
XP_062197001
LinkDB
All DBs
Position
2:12674244..12680749
Genome browser
AA seq
1270 aa
AA seq
DB search
MPESWRPAEANASPPSAAQSPGDVKGREACEPPGGGAMPRVPFHRLFAFADSTDAALMLL
GALGAVANGAAMPFMTVLFGNLIDAFGGALGIHDVVNRVSMVSLDFIYLAIASAVASFVQ
VTCWMVTGERQAARIRNLYLKTILRQEVAFFDKYTNTGEIVGRMSGDTVLIQDAMGEKVG
KFIQLVVTFFGGFIVAFAQGWLLTLVMMATIPPLVLAGAVMSNVVAKMASLGQAAYAESS
VVVEQTIGSIRTVASFTGEKRAVDKYSKSLKSAYKSGVREGLAAGLGMGTAMVLLFCGYS
LGIWYGAKLILEKGYTGAKVMNVIFAVLTGSLALGQASPSMKAFAGGQAAAYKMFETINR
TPEIDSYSTTGRKLEDIRGNIEFKDVYFSYPTRPDEQIFKGFSLTIPSGTTVALVGQSGS
GKSTVISLIERFYDPQLGDVLIDGVNLKEFQLRWIRSKIGLVSQEPVLFAASIKENIAYG
KDNATDQEIRAAAELANAAKFIDKMPQGFDTSVGEHGTQLSGGQKQRIAIARAILKDPRI
LLLDEATSALDAESERIVQEALDRVMTNRTTVIVAHRLSTVRNADTIAVIHQGSLVEKGP
HNELLKDPEGAYSQLIRLQEAIRQDKPDRKGDSGARSGKQSINKSASRRSSHDNSSHHSF
SVPFGMPLGIDIQDGSSKELCDEMPQEVPLSRLASLNKPEIPVLILGSIASVVSGVIFPI
FAILLSNVIKAFYEPPHLLRRDSQFWSSMFLVFGAVYFLSLPLSSYLFSVAGCRLIRRIR
LMTFEKVVNMEIEWFDHPENSSGAIGARLSADAAKVRGLVGDALQLVVQNSTTLVAGLVI
AFVSNWELSLIILALIPLIGLNGWIQMKFIQGFSADAKMMYEEASQVANDAVSSIRTVAS
FSAEEKVMDLYKKKCEGPLRTGIRTGIISGIGFGVSFFLLFGVYAASFYAGARLVEERKT
TFPKVFRVFLALAMAAIGVSQSSTLTSDSFKAKSAASSIFAIVDRKSRIDPSEDAGVTVE
TLQGNIEFQHVSFRYPTRPDVQIFRDLCLTIHAGKTVALVGESGSGKSTAISLIQRFYNP
DVGHILLDGVDIQKFQLRWLRQQMGLVSQEPALFNDTIRANIAYGKDGQATESEIIAAAE
LANAHKFISSSLQGYDTMAGERGAQLSGGQKQRVAIARAIVKNPRILLLDEATSALDAES
ERVVQDALDRVMVNRTTVIVAHRLSTIQNADLIAVVRNGVIIEKGKHDTLINIKDGAYAS
LVALHSAGSS
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgccggagtcctggagaccggcggaggcgaatgcctccccgccgtcggcggctcagagc
ccgggcgatgtcaaggggcgcgaggcgtgcgagcctccgggcggcggcgcgatgccgcgg
gtgccgttccacaggctgttcgcgttcgcggactccacggacgcggcgctgatgctgctg
ggcgcgctcggcgccgtggccaacggggccgcgatgccgttcatgaccgtgctctttggc
aacctcatcgacgccttcggcggggcgctcggcatccacgacgtcgtcaaccgggtctcc
atggtctcgctcgacttcatctacctcgccatagcctccgccgttgcgtcgttcgtccag
gtgacgtgctggatggtcaccggcgagcggcaggcggcgcggatacggaacctgtacctg
aagaccatcctgaggcaggaggtcgccttcttcgacaagtacaccaacaccggcgagatc
gtcgggaggatgtccggcgacacagtgctgatccaggatgccatgggcgagaaggttggc
aagttcatccagctggtggtgacattcttcggtggcttcatcgtcgccttcgcgcaaggc
tggctgctcaccctggtcatgatggccaccatcccgccgctcgtcctagcgggcgcggtc
atgtcgaacgtcgtggcgaagatggcgtccctgggccaggcggcctacgcggagtcgtcg
gtggtggtggagcagactatcggttccataagaacggttgcatctttcaccggagagaaa
cgggcggtggataaatacagcaagtccctgaagagcgcctacaagtccggcgtccgggag
ggcctcgccgcggggctcggcatgggcacagccatggtgctcctcttctgcggctactcg
ctggggatatggtatggcgccaagctgatccttgagaaggggtacaccggagccaaggtc
atgaatgtgatctttgcagtcctaaccggttctcttgctctaggtcaggcgtcgccaagc
atgaaagcatttgcaggtgggcaagcagctgcatacaaaatgtttgagacaatcaacaga
acaccagagatcgactcgtatagcaccacagggaggaagctggaggacattcgagggaat
atcgagtttaaggatgtctatttctcctatccaacaaggcctgatgagcaaatattcaag
ggtttctctctcaccatacctagtggcacaacggtcgcattggtaggccagagcgggagt
ggtaaatccacggtcatcagcctaattgaaaggttttacgaccctcaacttggtgatgtt
ctgatagatggtgtgaatctcaaggagttccagttaaggtggatcagaagtaaaattggc
cttgtgagccaagagccagtcctatttgctgccagcataaaggaaaacatagcttacggc
aaagacaatgcgacggatcaggaaattagagctgcggctgagcttgccaatgctgccaaa
ttcattgataaaatgcctcagggctttgatacttctgttggtgagcatgggacacagctt
tctggtggacagaagcaaagaattgccatcgcaagagcaattctgaaagatccaagaatc
ctactattggatgaagctacaagtgctctggatgcagagtctgaaaggattgtgcaggag
gctcttgacagggtcatgacaaacaggacaactgtcatagttgcgcaccgtctgagtact
gttagaaatgctgatacaattgctgtcattcatcaaggatcactggttgaaaagggtcca
cacaatgagcttctgaaggatccagaaggagcttatagccagctgatacggctacaggaa
gcaatccggcaggacaagcctgatcgaaagggtgattctggagctcgttcgggcaaacag
tcaataaataagtcagctagccggaggtcatcccatgataacagcagccaccactctttc
tcagtaccattcggtatgcctcttgggatcgacattcaggatggttcatctaaggaactt
tgtgacgagatgccacaggaagtgcctctcagccgccttgcatctctgaacaagccagag
ataccggtgctcatactaggttccattgcctcggtcgtcagtggagtaatcttcccaatc
tttgcgatactcctgtcaaatgtgatcaaagcattctatgagcccccacatctgctaagg
agggattcacagttctggtcatccatgttcttggtgtttggtgcagtgtacttcctgtca
ctccctctcagttcgtaccttttctctgtagctgggtgcaggctgatcagaaggatcagg
ctgatgacatttgagaaggtggtaaacatggagatcgaatggttcgatcacccagaaaac
tcaagtggagctattggtgcaaggctatcagctgatgcagcaaaagttagagggcttgtg
ggtgatgcacttcaattggttgtgcaaaactctacaaccttagttgctggtttggtaatt
gccttcgtttcaaactgggagttatcacttatcatcttagctttaataccgctcattggc
ctaaatggatggatccagatgaagtttattcagggtttcagtgcagatgccaagatgatg
tatgaggaggcgagccaagtggccaatgatgcagtaagcagtataagaacagtagcctca
ttctcagctgaagaaaaggtgatggatttgtacaagaaaaaatgtgaaggccccctaaga
acaggaatcaggacagggattataagtggaattggttttggcgtttcctttttcttgcta
tttggggtatatgcagctagcttttatgctggtgctcggcttgtcgaggaaaggaagaca
actttccctaaagttttcagggttttccttgctcttgcaatggcagcaattggggtgtca
caatcaagtacccttacatcggattctttcaaagcaaaatctgctgcatcttctatattt
gcaatagtggaccgaaaatctaggatagacccaagtgaggatgcaggggtgactgttgag
acactgcaaggaaatattgaattccagcatgttagctttagatatccgaccaggccagat
gttcagattttccgggacctctgcttgacaattcatgctggaaagactgttgcgcttgta
ggagagagcggtagtggcaaatcgacagcaatttcattgattcagaggttctacaatccg
gatgtaggccatatactactagatggcgtggacatacagaagtttcagctaagatggcta
aggcaacaaatgggcctggttagtcaagaaccagctttgtttaacgatacgatacgggca
aacattgcttatgggaaggatggacaagcaacagaatctgagatcatagctgctgcagag
ttggcaaatgctcacaaatttatcagttcttcgctccaggggtatgacacaatggctgga
gagcgtggagctcagttgtcaggagggcagaagcagcgtgtggcgatcgcccgcgcaatt
gtgaagaaccctaggatcctgctgctggacgaagcaaccagtgcactggatgctgaatcc
gaacgggtggtccaggatgcgctggacagggtgatggtgaaccggacaacggtgatcgtc
gcacaccgcttatcaacaatacaaaatgcggatttaattgcggtcgtgaggaatggggtg
atcattgagaagggaaagcacgataccttgatcaacatcaaggatggcgcgtacgcgtcc
ctcgtcgcccttcactcagcaggctcttcatag
DBGET
integrated database retrieval system
