Phragmites australis (common reed): 133900069
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Entry
133900069 CDS
T10575
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
133900069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133900069
Enzymes [BR:
paua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
133900069
Membrane trafficking [BR:
paua04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
133900069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Parecho_VpG
Thionin
Motif
Other DBs
NCBI-GeneID:
133900069
NCBI-ProteinID:
XP_062197147
LinkDB
All DBs
Position
19:complement(5922717..5932751)
Genome browser
AA seq
1021 aa
AA seq
DB search
MGPVRLGPVLLLQVLLVAAAGTGEAVYIPYNTSAGVVAGKLNVHVVPHTHDDVGWLKTVD
QYYVGSNNSIQGACVQNVLDSLIPALLKDENRKFIYVEQAFFQRWWRNQNDMIKDTVKGL
ISSGRLELINGGMCMHDEAAVHYIDMIDQTTLGHRFIKEEFGQIPRIGWQIDPFGHSAVQ
AYLLGAEVGFDAFYFFRIDYQDRDTRKGTKELEVVWRGSKTFGSSADIFAGIFPKNYEPP
PGGFYFEVDADSPVVQDDPFLFDYNVEERVNDFVAAALAQANITRTNHIMFTMGTDFKYQ
YAESWFRNMDKLIHYVNKDGRVNALYSTPSIYTDAKYAANEQWPLKTNDFFPYADDPNAY
WTGYFTSRPALKRYVRMMSGYYLAARQLEFFKGRHSSGLTTDSLGDALALAQHHDAVTGT
EKQHVANDYAKRLSIGYTRAQELVSISLACLTESGSKSRCSSPTTKFSQCLLLNVTYCPP
SEMDFPKGKSLVVLVYNSLGWKREDVLRIPVFSDSIAVHDSEGREIESQLLPMATSSLNI
RDKHVKAYLGTLPGAKPKFWLAFPVSVPPLGFNTYFVSNTKKSASVSSKSTLYSPQGSKS
SNLQVGQGHLKLQYNAAGALSLYSDSKTQVEANFEQKYKYYIGQDGNGSDPQASGAYIFR
PNGTVPIKTEGQAPLTVLRGPILDEVHQQINSWIYQINRVYKGKDYVETEFIVGPIPIDD
GNGKELATEIVTNMATNKTFYTDSSGRDFIKRIRDYRSEWKIEVHQPVAGNYYPVNLGIY
VEDGSKELSVLVDRSVGGSSIKDGQIELMLHRRLLHDDGRGVAEALNETVCLDDQCEGLV
IEGKYYLKIDPKGEGARWRRTFGQEIYSPLLLAFSEQDGGNWANSHISKFSAMDPTYSLP
DNVALLTLQELEDGSVLLRFAHLYEAGEHKDLSALASVDLKRVFPNNKIGKVIETSLSAN
QERAAMEKKRLKWKVEGPPADEKVVRGGPVDPSKLVVELGPMEIRTFIISFGHSISGKQL
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgggccccgtgcggctcggccccgtcttgctcctccaagtcctcctcgtggccgccgcg
ggcaccggcgaggcggtttacatcccctacaacacgtcggcgggggtggtggcggggaag
ctcaacgtgcacgtggtgccccacacccacgacgacgtcggctggctcaagaccgtcgac
cagtactacgtcggatccaacaactccatccagggggcgtgcgtgcagaacgtgctggat
tcgctcatcccggcgcttctcaaagacgagaaccgcaagttcatctatgtggagcaggca
ttcttccagagatggtggaggaaccagaacgacatgatcaaggatacggtgaaggggctc
atcagctctggacgattggagttaataaatgggggcatgtgcatgcacgatgaggccgcc
gtacactacatcgacatgatcgatcagactacgctcgggcacaggttcatcaaggaggag
tttggtcagattccacggattggctggcagattgatccgtttgggcactctgcggttcag
gcttaccttcttggcgcagaagtaggatttgatgctttctatttcttccggattgattac
caagaccgtgatacgcgaaagggaacaaaagaacttgaggttgtatggaggggctccaag
accttcggctcatcagctgatatctttgctggtatctttccaaaaaactatgaaccacct
cctggtggattctattttgaagttgatgctgattcccctgtcgtccaggatgatcccttt
ctttttgattataatgttgaagaacgagtaaatgattttgttgctgcagctctagcacag
gcaaatatcacgaggacaaaccatatcatgtttacaatgggaacagacttcaaataccaa
tacgcagagagttggttcagaaatatggacaaattaattcactatgtgaacaaggacggt
cgtgtcaatgctctttattccacaccttccatttatactgatgcaaaatatgctgcaaat
gagcagtggcctctcaagaccaatgatttcttcccatatgcagatgacccgaatgcgtat
tggacaggttacttcacaagcagacctgccttaaaacgatatgtccgcatgatgagtgga
tattatctggcagctaggcagctggagttctttaaagggaggcacagctcaggtctcaca
acagatagtttaggtgatgctctagctcttgcgcagcaccatgatgctgttacaggaaca
gagaagcaacatgttgcaaatgattatgcaaagagattgtcaattggatatacacgagcc
caggagctcgtttcgatttctcttgcttgcttgactgagtcaggctccaaatcacgttgc
tcatccccaacaacaaagttttcacaatgtcttctgctaaatgttacgtattgccctcct
tctgagatggactttcctaaaggcaaaagcttggttgttcttgtatacaactctcttggg
tggaaacgagaagacgtccttcgtataccagttttcagtgattccattgctgttcatgat
tctgaaggaagagaaattgaatcacaacttctgcctatggctacttcctcattgaacata
cgggacaaacatgtcaaggcttacctgggcacattgccaggtgcaaagcccaagttttgg
cttgcttttcccgtgtctgtaccacctcttggttttaatacttattttgtctcaaacacg
aagaaatcagcatctgtgtcttcgaaatccactctatactcgcctcaaggaagtaaaagc
agtaacctacaagttgggcaagggcacttgaaacttcaatataatgcagctggagcatta
tctttgtactccgatagtaagactcaggttgaagcaaatttcgaacagaaatacaagtat
tacattggacaggatggaaacggaagtgatcctcaggcttccggagcatacatatttcgc
cctaatggcacagttcctatcaagactgagggtcaggctcctctcacagttctgcgtggg
cccatactggatgaagtgcaccagcaaattaattcatggatatatcagattaacagagtt
tacaaggggaaggactatgtggaaactgaattcatagttgggcctataccaatagatgat
ggaaatggaaaagaactagcaactgaaattgttacaaacatggcgacaaacaaaacattc
tatactgattccagtgggcgcgatttcatcaaaaggataagagattatcgatcggagtgg
aagatcgaagtgcaccagcctgttgctggaaactattatcctgttaatcttggcatttat
gtggaagatggcagcaaagagttgtctgtactggtagataggtcagttggaggttccagc
ataaaggatggacaaatagagctaatgctacacaggaggctgctccatgacgatggacga
ggtgtcgcagaggcgctaaatgaaacagtctgtctcgatgatcaatgtgaaggactagtt
atcgaaggaaagtactatcttaaaattgatccaaaaggagaaggagctaggtggcgtcgg
acatttggccaggaaatatactctcctctccttcttgctttctcagagcaggatggaggc
aactgggcaaactctcatatttcaaaattctctgcaatggatccaacgtacagcttgcct
gataatgttgcattgcttacccttcaggaactcgaagatggaagtgttctccttcggttt
gctcacctatacgaggctggagagcacaaggatctttcagctttggcgagtgtcgacctc
aagagagtattcccgaacaacaagattggcaaggtcattgaaacaagcttatctgcgaac
caagaacgtgcagccatggagaagaagcgcctgaaatggaaggtggaagggcctcctgct
gacgagaaggtggtccggggaggccccgtggatccttccaagcttgtcgtcgagctgggg
ccgatggagatccgcacgttcatcatcagcttcggtcacagcatcagcggcaagcagctt
ctctga
DBGET
integrated database retrieval system
