KEGG   Phragmites australis (common reed): 133900094
Entry
133900094         CDS       T10575                                 
Name
(RefSeq) transportin MOS14 isoform X1
  KO
K15436  transportin-3
Organism
paua  Phragmites australis (common reed)
Pathway
paua03013  Nucleocytoplasmic transport
paua03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    133900094
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    133900094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:paua03016]
    133900094
Transfer RNA biogenesis [BR:paua03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    133900094
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd UME
Other DBs
NCBI-GeneID: 133900094
NCBI-ProteinID: XP_062197196
LinkDB
Position
19:4972954..4988778
AA seq 1009 aa
MDAGEASELRARLAAAVHALNHGAHPSARLAANQWLLGLQRSPQAWAVATSFLAAPDPPP
PADLLFFAAQMLRRKIQSPGAALALPGAQLLDALLLAARRFCSAPAPRQLLTQICLALSA
LALRAEGGVDGLFARMPHLPAPAVLELLTVLPEEAAQDQGGDTGVDAAARCRFTRELLAH
APAVLEFLHAQSEKADADDGVPLHERNRRILRCLLSWVRVGCFSETPAAALAAHPLLTFA
FNSLQVSFSFDVAIEVMIELVSQYQELPQAFLTKMPYIREVLLLPALANKNEKIIAGLAS
LMCEVGQAALALVAEGGSQSLALADALLRCVAFTSEDWEIADSTLQFWCSLAHFTLGIDV
KTAKRNATHELFFPVFSSLLDALLFRAQIDTDEHGTDGASCIPDGLAQFRMNLEELLVDI
CLLLGAPAYINKLFSGGWGFSGQSVPWKEVEVRMYALSLVADTILQDESPFDFSIIMHFV
NILSSRTPVELNGSLFLVYKSFGDVIGSYSKWLSSSQSNIKPLLMFCASGISKSASSNAC
SLALRKVCEDASSFIHEPQNLEILFWINEGLDKGNLRLEDEEEIISAIMHALSSVRDKEL
RKSSLARLLCSSYSVAEKIIDIDRDESLRQNPAAYTQALDLAVRGLYRMGALFGHLATSI
TSGLIDDDIILALLGIFWPLLEKLFRSSHMENVSLSAAVCHSLSSAIHSCGQHFHILLPK
VLECLSTNFLLFQRHDCFLRTAANVIEEFGHKEEYGALFVRTFETLSSASSISALNSSYT
CDQEPDLVEAYTYFTSVFIRCCPKEAIIASGSLLELSFQKAAICSTAMHRGAALAAMSYM
SCFLEVGLAAVLESPECIPDGSPCVVLVQILARCGEGLLSNVLYALLGVSALSRVHKSAT
ILQQLAALCSLCERTTWKAVLCWDSLYGWLQSTVKSLPSEYLQPGEAEMIVPLWLKVLEN
AGSDYLRSRTGDNVRNHQGYMQGKGGRTLKRIVRDFAESHRNVPNPCPS
NT seq 3030 nt   +upstreamnt  +downstreamnt
atggacgccggcgaggcgtcggagcttcgggcgcggctggccgcggccgtgcacgcgctc
aaccacggcgcgcacccctccgcccgcctcgccgccaaccagtggctcctcggcctgcag
cggtccccgcaggcgtgggcggtcgccacttccttcctggccgccccggacccgcccccg
cccgcagacctcctcttcttcgccgcgcagatgctgcgccggaagattcagtcccccggc
gccgcgctcgcgctccccggcgcgcagcttctcgacgcgctactcctcgcggcgcggcgg
ttctgctcggccccggccccgcggcagctactcacgcagatctgcctggccctctccgcg
ctcgcgctccgcgccgagggcggcgtcgacgggctcttcgcgcggatgccgcacctgccg
gcccccgccgtgttggagctgctcaccgtgctccccgaggaggccgcgcaggaccagggc
ggcgacacgggggtcgacgccgccgcgcggtgccggttcacgcgcgagctgcttgcccac
gcgcccgccgtgctcgagttcctccacgcgcagtccgagaaggcggacgccgacgacggg
gtccccctccacgagcgcaaccgtaggatcctccggtgccttctgagctgggtccgcgtg
gggtgcttctcggagacgccggccgccgcgctggccgcgcacccacttctcacgtttgcg
ttcaactcgctgcaggtgtccttctcgtttgacgtggctatagaggttatgatcgagctt
gtcagccagtaccaagagttacctcaggcctttctaactaagatgccttacataagggaa
gttcttcttctaccagctctagccaacaaaaatgagaagatcattgctggtcttgcttct
ttgatgtgtgaagttggtcaggcggcacttgctttggttgcagaagggggtagtcaatca
cttgctctcgccgatgcacttttgagatgcgtagcttttactagcgaagattgggaaatt
gcagattcaaccttgcaattttggtgcagtttggcacattttactcttggtattgatgtg
aagacagccaaaagaaatgcgacacacgagttgtttttccctgtgttttcttcactgctg
gatgctcttttatttcgtgctcagattgacactgatgagcatggcactgatggagcatct
tgtatacccgatggactagcacagttcagaatgaacttggaggagctccttgttgatatt
tgtttgcttctaggtgcccctgcatatataaataagcttttttctggtgggtggggcttc
tccggccaatcagttccttggaaggaggtggaagttagaatgtatgcacttagcctggtt
gctgacacaattttacaagatgaaagcccctttgatttttcaatcataatgcattttgtg
aacattctgtccagcagaacacctgttgaactgaatggaagtctgttcttggtgtacaaa
tcgtttggtgatgtcattggttcttactcaaagtggctatcgtcttctcaaagtaacatt
aaacccttactcatgttttgtgcatcagggatttcaaaatctgcatcatcaaatgcttgc
tccttagccttgcgcaaagtttgtgaggacgcttcttcattcatccatgagcctcagaat
cttgaaattcttttctggattaatgagggcttggataaagggaacctgcggctagaggat
gaggaagagatcattagtgcaattatgcacgctctaagttctgttcgtgataaggagttg
aggaaaagttcactggccaggttactttgttccagctactcagtggcagaaaagattatt
gacatagacagagatgaatcactaaggcaaaaccctgctgcttatacgcaagctttggac
cttgcagtccgtggtctttacaggatgggtgctttgtttggtcatttggctacctccatt
acatctggtctgatcgacgatgatataattttggctcttcttggaatattttggccactt
cttgagaagcttttccgatcatctcatatggagaatgttagtttatcggcagctgtatgt
cattctctttcttcagctattcattcttgtggacagcactttcatattttgttacccaaa
gtcctggaatgcttatctacaaatttcttgctttttcaaaggcatgactgcttcttaaga
acagctgccaacgttattgaagaatttggccacaaggaagaatatggggctttatttgtt
agaacttttgaaacacttagctctgcatcttcaatatcagctctgaattcatcttatacg
tgtgatcaagaacctgatctagttgaagcctatacctactttacatctgtgtttatccgc
tgctgtccaaaggaagctatcatcgcatctggctcgctgcttgagttatcatttcaaaag
gcagctatatgctctacagcaatgcaccgaggagcagcacttgcagcaatgtcgtatatg
tcatgttttcttgaggttggccttgctgctgtgctagaatctccagagtgcatccctgat
ggatcaccttgtgtggtactagttcaaatcttggcacgctgtggcgaaggtctattatcc
aatgtactttatgctctacttggtgtatcagccttgtcaagggtgcataaatctgccaca
atattgcagcagctggcggcattgtgcagtctctgtgagagaacgacatggaaggctgtt
ctttgctgggattctctttatggatggctacaatcaacggtgaaatccctgccctcagag
tatctgcagccaggggaagctgaaatgattgttccattgtggctcaaggtgcttgagaat
gcaggctcagactatcttcgcagtaggactggtgataatgtcagaaatcatcaaggttac
atgcaaggaaaaggtggcagaacacttaaacgcatagttagagattttgcggaaagccat
cggaatgttccaaacccctgtccttcatga

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