Phragmites australis (common reed): 133900100
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Entry
133900100 CDS
T10575
Name
(RefSeq) actin cytoskeleton-regulatory complex protein PAN1-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133900100
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133900100
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
POL2_thumb
Motif
Other DBs
NCBI-GeneID:
133900100
NCBI-ProteinID:
XP_062197204
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Position
19:complement(25529906..25539887)
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AA seq
603 aa
AA seq
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MAGTKADANAETGDGGGGGGGGGGGGSFSEQRLVEKLNKLNNSAASIQSLSQRCIFHRKR
ARRVVDTWEKQFNSATKDKKISFLYLSNDILQNSKRKGGEYVNEFWRVLPRSLKHVYEIG
GDEGKKVVARLIRIWDERKVFGTRIGSLKDDILGDNPPALDNTGNSLNPSSNPSSNSKAA
RKDSSTIVKKLTVGGMPEKIVTAYQSVLDKHFDEDTALKKCKSTVEVWKKINKVIDDACT
HGIQPASSLISDLQEQEATLKKCIEQLESVETVRIFLINQLKEALSEQESKSELLHSQLK
VARIEAARAMQLRQQHGGALVTNGAGSSSSPLMITPERTATMVQGSGVRSISPQLQPLHP
ATSFPTAVGAVGDESKKTAAAMADKLASLSAPEQVLSSILSSFVAEHAASMNSGSPSGEL
SAGPPGFQIEKRSRLEKSAQTGDMVAPPFFGKLPQLQQQIGAVPTSLGGTQPPTQANQAP
GPFPPPPPPLPSLLPPLLQQYSQSTGGMIGMGAFGMMAGSMPPPPPLSNILPAGFPRPSG
PPPPPPFPPAQNQPQQQQSPQAPQQSPTSAGFFQSSGIGFFPPMQVQQSSVQRHSPSYKG
STG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcacgaaggcagatgcaaacgcggaaacgggggacggcggcggcggcggcggc
ggcggcgggggaggcggctcctttagcgagcagaggctggtcgagaagctcaacaagctc
aacaactcagcggcgagcattcagtcactttcacaacggtgcatttttcaccgcaagaga
gccagaagggttgtagacacatgggaaaagcagtttaatagtgcaacaaaggataagaag
atatcgttcctgtatctatcaaatgacatactgcaaaacagcaaacgtaagggaggagaa
tatgtgaatgagttctggagggttctacctagatcactgaaacatgtctatgaaattggg
ggagacgaaggaaagaaagtggtggcgagattgatacgaatttgggatgaacggaaagtt
tttgggacccgtattggaagtctgaaagatgacattcttggtgacaaccctcctgcattg
gataacactgggaatagtttgaaccctagctctaatccctcttcaaactccaaagctgca
cggaaggattccagtacaatagtaaaaaaactgactgttggcgggatgcctgaaaagatt
gtaactgcataccaatcggtgcttgataaacattttgatgaagatacagctttgaaaaaa
tgtaagagtactgttgaggtttggaagaagataaataaagttatagatgatgcttgtacc
catggtattcagccagcatcatcattgatttccgaccttcaagaacaagaagcaacccta
aagaagtgcattgaacaacttgaaagtgtcgagacggtgaggatattcctgatcaatcaa
ttaaaagaagccctcagcgaacaggagtcgaagtcggagcttcttcacagccagttgaaa
gttgctcgaatagaggctgcacgtgccatgcaactaagacaacaacatggtggtgccctt
gtcaccaatggtgcaggatcgagctctagtccactcatgattactccagagcgaacagct
accatggtgcagggttcaggagtaaggtcaatatctccccagttacagccactgcatcct
gcaacctcatttcccaccgcagtcggtgcagtgggtgatgagtccaagaaaacggcagca
gctatggcagataagcttgcatctttgtcagcacctgagcaggtgctgtcctccattttg
tcatcctttgtcgctgagcatgctgcttccatgaatagtggatcgccttctggagaactc
tctgcaggaccaccaggcttccagattgaaaagaggtctaggcttgagaaatccgcacag
actggtgacatggttgctcctcccttttttgggaaattgccacagttgcaacaacagatt
ggagcagtgcctacttctcttggaggcacacaaccaccaacacaagcaaaccaagcacct
ggcccatttccaccacctccaccaccattgccatctctattgccaccacttctgcaacaa
tacagtcaaagtactggagggatgattggaatgggagctttcgggatgatggccggctct
atgccacctccgcctccactgtctaacattctgccagcaggttttccaagaccaagcggg
ccaccccctccacctccctttccaccagctcagaaccaaccccagcaacagcagtctcct
caggcaccacagcaatcaccgacatcagccggattctttcaatcatcaggcattgggttc
ttcccaccgatgcaggtgcagcaatcgtctgtccaacgacattcgccaagctataaaggc
agcacaggctga
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