Phragmites australis (common reed): 133900118
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Entry
133900118 CDS
T10575
Name
(RefSeq) two-component response regulator-like APRR3
KO
K12130
pseudo-response regulator 5
Organism
paua Phragmites australis (common reed)
Pathway
paua04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
133900118
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
CCT
DUF5000
Motif
Other DBs
NCBI-GeneID:
133900118
NCBI-ProteinID:
XP_062197231
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Position
19:23831519..23836729
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AA seq
695 aa
AA seq
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MSPHADAATATASSGASPSPSPAAAAAVGRGMVRSDQILPRRSLRVLLVEHDDSTRQVVT
ALLRKCGYRVAAVADGMKAWEVMRERAYAFDLVLTEVDMPTLSGIQLLARIAAAAECKNI
PVIMMSSQDSIGTVLKCMQKGAVDFLVKPLRKNELRNLWQHVWRRHAMNSQTNGSENNAA
SNHISANAANGSKTGENSDEESDAQSFRSKRETEIQSVEKLSKICTDEGAGSSRKLKIQN
ESYNTKVHVSKGSDDAPSGSACDISKLQAFSAEKNARSKCLNGITSAKVAEQIMDNALRF
ADASSRRPSNLGKDLAMTQPTADRKCKSSVMENNAVMENNLGENSKGATIGHAESCPSQF
LEINLGKQHCLNGYANQEFREKDTFNHSNSSAFSRYGNKTIEPSAQQQLFPSLCITRQEP
VYEKDPVLQPNGVLPSHEHNTGESRMQTRIPLGSSTDGAAILCSSSAREDAGTSNSSHRK
DSLNHPSYGFIPLPIPVGAAMPYHYGAILQSLYYPQAHVHCDSAGINKAAIQHASGQFSY
HENHRKPSQVDEHKQLDENQLHHSRQVLRESGELIDLARAHGELVNQSASCSQDICKGIG
CTGSGETVNTNTVVVLESGNESGVQNCGYNGLDSERSRREAALIKFRIKRKDRCFEKKVR
YHSRRKLAEQRPRVKGQFVSQKLKSATTTDAETDQ
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtctccccacgccgacgcagccacggccaccgcctcttccggcgcgtcgccgtcgccc
tccccagcggcggcggcggcggtggggcgggggatggtgcggtcggaccagatcctcccg
cgccgctccctccgcgtcctcctcgtcgagcacgacgactccacccgccaggtcgtcacc
gcgctcctccgcaagtgcggctaccgcgtggcggcggtggcggacgggatgaaggcgtgg
gaggtcatgcgggaacgcgcgtacgccttcgacctcgtgctcacggaggtcgacatgccc
acactctcgggcatccagttgctcgccaggatcgccgccgccgccgagtgcaagaacatc
cccgtcatcatgatgtcgtcccaagattctattggcacggtgctcaagtgcatgcagaag
ggtgcagtggacttccttgtaaaaccactgagaaagaatgagttgcgtaacttgtggcaa
catgtatggaggcggcatgcaatgaatagccaaacaaatggatcagaaaataatgcagcc
agcaatcatataagtgccaatgctgctaatgggtcaaagacaggagaaaacagcgatgag
gaaagtgatgcccaaagctttagaagcaagagggagactgaaattcagagcgttgagaaa
ttatcaaagatttgtacagatgaaggggctggttcatccagaaaacttaaaatacagaat
gagtcttataacacaaaagtgcatgtgtcaaaaggcagtgatgatgctccaagtggaagt
gcgtgtgacattagtaagctacaagcgttttcagctgagaagaatgcacgctccaaatgc
cttaatggtattacttctgcaaaggttgctgagcaaataatggataatgccttgaggttc
gctgatgcaagttcacgtcgtccaagcaatcttggcaaagatttggctatgacccaacca
acagctgacagaaaatgcaaatcttcagtcatggaaaataatgctgtcatggaaaataac
cttggtgaaaactcaaagggtgctacaataggtcatgcagaatcttgcccctcccaattt
ctggagatcaacttaggaaagcaacactgtcttaatggttatgcaaaccaagagtttagg
gaaaaagataccttcaatcattcaaattcctctgccttttcgagatatggtaataaaacg
atagaaccatcagctcagcaacagttgttcccttctctctgcataacccgccaagaacct
gtgtatgaaaaggacccagttctacaacccaatggggtattgccgtcccatgaacataat
acaggcgagagtagaatgcaaactcgaattcctttgggcagtagcacggatggtgctgct
atcctgtgttccagtagcgcaagagaagatgctggtacaagcaattcctctcatagaaag
gacagcctgaaccatccttcatatgggtttatacctcttccaattcctgttggtgctgcg
atgccctaccattatggtgcaattctgcagtcattatactacccacaggctcatgttcat
tgtgattcagctggcatcaacaaggcagcaattcagcacgcctctggtcaatttagttac
catgaaaatcacagaaaaccatctcaggttgatgaacacaaacagttggatgaaaatcag
ctgcatcattcaagacaagttctccgagaatcaggagaactaattgacttggcaagagct
catggggagcttgttaaccagagtgctagctgcagccaggatatctgtaaaggaattgga
tgcactggtagtggtgaaactgtcaatacaaatacggtagttgtcctagaaagtggcaat
gaaagtggtgtccagaactgcggttacaatggattggatagtgaacggtctcgccgtgaa
gctgccttgataaaatttcgtattaaaagaaaagaccgatgctttgagaaaaaggttaga
tatcatagcaggaggaagctcgcagagcaaagaccgagagttaaggggcagtttgtgagc
caaaaactgaaatcagctacaacaacagatgcggaaactgaccagtaa
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