Phragmites australis (common reed): 133900376
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Entry
133900376 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133900376
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133900376
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133900376
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
DUF4302
SSP160
Motif
Other DBs
NCBI-GeneID:
133900376
NCBI-ProteinID:
XP_062197472
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All DBs
Position
19:complement(3301411..3306473)
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AA seq
389 aa
AA seq
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MASGTDETAKMESLTSPAAFVEGGIQDACDDACSICLEAFCESDPSALTGCKHEFHLQCI
LEWCQRSSQCPMCWQPISMKDPTSQELFEAVERERNIRTNQTRNTTIFHHPALGDFELQH
LPVVGNDAELEERILQHLAAAAAMGRAHHLGRREGHRGRSGSRPQFLVFSAHPNTPSADT
VSSSSAHVEGDNDSSPVTPRASESSPRAFRGGEAGNQSPGMLTYDAEQDAVVSSGNSTPV
SSPRFFNRRHSTGQTPDRAGPSDIQSFSDSLKSRLNAVSMKYKESITKSTRGWKERLFSR
NSSVADLGSEVRREVNAGIASVSRMMERLETRGGSRTGDSPTSSTSEVRPATESSEERVT
ESNSTTTVTTTTTSASNSSTPCVTTSGSN
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggaactgatgagacagctaagatggagagtttgacatcacctgcagccttt
gtggagggtggcattcaggatgcatgtgatgatgcgtgcagcatttgccttgaggctttc
tgtgagagtgacccttctgcattgaccggttgcaaacatgagttccatctccaatgcatt
ctggaatggtgtcagagaagttcacagtgtccaatgtgttggcagcctattagtatgaag
gatcctaccagccaagagctttttgaggcagtagagcgcgagaggaatattagaaccaat
caaactcgaaatacaactatatttcaccatcctgctcttggggattttgagttgcagcac
ttacctgttgttggtaatgatgctgaacttgaagagcgcatactacagcatctagctgct
gctgctgcaatgggaagggcccaccaccttggaagaagagaggggcacaggggccgatca
ggctctcgtccacagttcctggttttctctgcacatccaaacacaccttctgctgacaca
gtatcttcatcttctgctcatgtggagggagataacgattcaagtcctgtgacccctaga
gctagtgagtcatctccacgtgcttttcgcggtggggaagcaggtaaccaaagtccgggg
atgcttacctatgacgctgaacaagatgctgtcgtttcttccggaaatagtactcctgta
tccagtcctaggttttttaacaggagacattccactggacaaactccagacagggctgga
ccatcggatattcagtctttctcagactctctaaagtcccgcttaaatgctgtttctatg
aagtacaaagaatctattacaaaaagcactcgagggtggaaggagagactcttttcacgt
aactcatccgtggcggatcttggttctgaagtgagaagagaagttaatgctggaattgca
tctgtatcacggatgatggagcgtttggaaactagaggtggtagcagaacaggtgatagc
ccaacatcatccacttctgaagttcgtcctgctacagaatcaagcgaagagagggttact
gagagcaactctaccactactgtgaccaccactactacaagtgcttccaactcttccacc
ccttgtgtcacgacgtctggttcaaattag
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