Phragmites australis (common reed): 133900381
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Entry
133900381 CDS
T10575
Name
(RefSeq) autophagy-related protein 13b-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
paua Phragmites australis (common reed)
Pathway
paua04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133900381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133900381
03029 Mitochondrial biogenesis [BR:
paua03029
]
133900381
Membrane trafficking [BR:
paua04131
]
Autophagy
Autophagosome formation proteins
ULK complex
133900381
Atg1 complex
133900381
Mitochondrial biogenesis [BR:
paua03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133900381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
133900381
NCBI-ProteinID:
XP_062197477
LinkDB
All DBs
Position
19:complement(23982772..23987994)
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AA seq
611 aa
AA seq
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MAAAGPSEPPMVEQVITEFFAKSLHIVLESRSPYDSSRNFMRPSPPPSPLSASQPRDRWF
NLALRDCPAALENFDLWRQSNLEPLVIDIVLLQRDNTKTISAGGGRIIERWVIKYETSRS
SSGCGNSSKNDGKKSRNRSAEDHSLYRRTYSGATVLLRSLYLVVRLLPAYNLFQELNSSG
RIRPLSLSHKISSFVEPFTRAEDADMKHYAFAPIETLFGHLSLSVSYVPVPDVVAAPEPS
TPMPPELIMDYVGSPTTDFLRKFNSLPSDGIAPASFPMTRRHSWSNENGAGPSASPFPMN
SEPRGRLQPHILMPDNSPTAYSHPHTTSSSGKRKNTVSEECCPSPPLSPSPSHLPSPSYP
RNPLFRYESAPLSIPTVRAGAGGSGLPPSPCRKDKQQCSSQNENQTHSPNDKSVVAKDLV
RLGEFQNDKSLQKQVLSFGKYELGYFRGLKLTRTSSKLFIMDELDERELAFAWEDKDTII
DQLNRIDISDREDHESNQDLGGSLTRSPDAAIGILVRMLKNAPGLRERLLSIPAAPVPQE
PSSLQRVVTEERDSGASSSAAAHSFMLRSRTAADALEELNRYKEIREMILNRGKGHPCDS
KLEEKPTDGDP
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccggcccatcggagccgccgatggtagagcaagtgatcaccgagttcttt
gccaagagcctccacatcgtcctggagtcgcggtcgccctacgattcgtcgcgcaacttc
atgcggccctccccgccgccgtcgccgctgtctgccagccagccgcgggaccggtggttc
aacctcgcgctgcgggactgcccggcggcgcttgagaacttcgacctgtggcgacagagt
aaccttgagccgttggtcattgacattgtcctcttgcaacgcgacaataccaaaaccatc
agtgctgggggtggcaggatcatagagaggtgggttataaagtatgaaaccagcaggtcc
agcagtggctgtggtaatagtagcaagaacgatggcaaaaagtctaggaacaggtcagca
gaggatcatagcttgtacaggaggacatacagtggcgcgacagttttactccggtcactg
tatctggtcgtccggctcttgccagcatacaacctcttccaggaattgaattcatctggg
aggatccgtccactgagcctctcacacaaaatttcatcatttgtcgagcctttcacacgt
gccgaggatgcagatatgaaacactatgcatttgctccaattgaaactctctttggccac
ttgagcttgtcagtttcttatgtgccagtgccagatgtggtggcagcaccagagccatcc
acaccaatgccgccagagcttataatggattacgttggaagccccacaacagatttccta
aggaagttcaattccctaccttcagatggtattgcacctgcatcttttccaatgaccagg
cggcatagttggagcaacgagaatggagctggaccatcggcatcgccatttcctatgaat
tcagaaccccgtgggcgcttacagccacatatacttatgcctgataattctccaacagca
tactcacatccacataccacatcatcatctgggaagaggaaaaatacagtatctgaagaa
tgctgtccatcgccacctctgtcaccatcaccatcccatctgccttctcctagctatccg
agaaatcctttgttccgatatgagagtgctccattaagtattcccacagtgagggctggt
gcaggtggtagcggactgcctccttctccatgtaggaaggataagcaacaatgctcatct
caaaatgagaatcagacacattctcccaatgataaatcagtagtagcgaaggatttagtc
aggctgggtgaattccagaatgacaagtctttgcaaaagcaggttttatcttttggcaaa
tatgagttgggatattttcgtggactgaagttgactcggacctccagtaaacttttcatc
atggatgagctggatgaacgggagttggcttttgcttgggaagataaagacacaatcatt
gatcagctcaacaggatagatatctctgacagggaggaccatgaatcgaatcaggatctt
ggaggctcgttgacaaggtctccagatgcagcaataggtattcttgtgcgcatgctaaag
aatgctccaggcctgagggaaaggctactgtccatcccagctgccccagttcctcaggaa
ccttcttcacttcagagggtcgtgaccgaggaacgtgacagcggcgcatcaagttctgca
gcggcgcattcctttatgctgaggtcaaggacggcagcggatgcgctggaggagctgaac
agatacaaggagattagagaaatgatactgaatcgcggcaaaggacacccctgcgacagc
aagttggaggagaaacccacggatggagatccgtag
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