Phragmites australis (common reed): 133901061
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Entry
133901061 CDS
T10575
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic-like
Organism
paua Phragmites australis (common reed)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
Cas3-like_C_2
TRCF
SNF2-rel_dom
RecG_dom3_C
UPA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
133901061
NCBI-ProteinID:
XP_062198342
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Position
19:complement(5532101..5542714)
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AA seq
824 aa
AA seq
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MATPAPRAAPAAAPLPLLLLRLHPPALVRLPLPRLRLAAPAATATAASAAVAPDDISQLN
HRLRAIVRRRDAAAVARGPSSPGPVDPVQAEAYLRMIRDQQRLGLRQLRGESESDDGEEE
DGESGGGGEKKKGMAAGSSLGHRVDPRELEPGEYVVHKKVGIGKFACISAEDGVDYVFIQ
YADAMAKLAVDQAARMLYRYNLPHEKKRPRNLSKLNDNSTWEKRRLKGKLAVQKMVVNLM
ELYLQRMRQRRPPYPKPAAMDDFAAEFPYEPTPDQSQAFIDVEKDLMERETPMDRLICGD
VGFGKTEVAMRAIFTVVSAGYQAMVLAPTIILAKQHYDVMSERFSNYPDIKVAIFSGAQS
KEEKDELLTKIKNGDLHIIVGTHAILTERMAYNNLGLLVVDEEQKFGVQQKEKIASYKSS
IDVLTLSATPIPRTLYLALTGFRDASLMSTPPPERVAVKTYVSVFSKERALSAIKFELQR
GGQVFYVVPRIKAIDDVLHFLKDSLPDVPIDVAHGKKVSKTIQLAMEKFACGEVKILVCT
HIIESGIDIANANTMIVQYAELFGLAQLYQLRGRVGRSGREGFAYLFYTDKSLLSRVAMD
RLGAIKEHSDLGQGFHVAEKDMGIRGFGSLFGEQQSGDVANVGIDLFFDMLFDSLSKVDK
FCLVPVPYKDVQLDINISPHLSSEYISYLENPVELLNEAAKAAEKDLWTLIQFTEDLRRR
YGKEPRDMELLLKKLYVRRMAADLGISQVYPSGKIILMKTNMNKKVFRLMTEAMTSEAYR
NSLSYAGKEIKAELLVSLPDTLILNWLFHCLADCYAVIPALVKY
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggccacgcccgcccctcgcgccgcgccggcggcggccccgctcccgctcctcctcctc
cgcctccacccgccggccctggtccgcctcccgctccctcgcctccgcctcgcggccccg
gccgccacggcgacggcggcctcggccgccgtcgcccccgacgacatatcgcagctcaac
caccgcctccgcgccatcgtccgccgccgcgacgccgccgccgttgcccgcggaccatcg
tcccccggccccgtcgacccggtccaggcggaggcctacctccgcatgatccgcgaccag
cagcggctcggcctccgccagctccgcggcgagtcggagagcgacgacggagaggaggag
gacggagagagcggaggcggcggggagaagaagaaggggatggcggcggggagctcgctg
gggcaccgggtggacccgcgggagctggagcccggggagtacgtcgtgcacaagaaggtc
ggcatcggcaagttcgcctgcatcagcgccgaggacggcgtcgattacgtcttcatccag
tacgcggacgccatggccaagctcgccgtcgaccaggccgcgcgcatgctctaccgatac
aacctgcctcatgagaagaagaggccacggaatttgagcaagctgaatgataattccact
tgggagaagaggagactaaaagggaagcttgctgttcagaagatggttgtcaacttgatg
gaactgtatttgcaaaggatgaggcagagaagacctccatacccaaagccagcggcaatg
gatgactttgctgctgaatttccttatgagcctactccagaccaaagccaggcttttata
gatgttgagaaagatctgatggaaagggaaacaccaatggatagattgatctgtggagat
gtgggttttggcaaaacagaagttgcaatgcgtgctatattcactgttgtatctgcagga
tatcaagctatggttctcgcaccaactataatacttgccaagcaacattatgatgtaatg
tctgagcgtttttccaactatcctgatataaaggttgccatatttagtggtgcccagagc
aaagaggagaaagatgagctattaacaaagattaagaatggggatttgcacatcattgtc
ggaactcatgctattcttacagaaagaatggcctataacaatcttggtctcctagtggtg
gatgaagaacaaaagtttggtgtccaacagaaggagaagattgcatcatacaagtcttct
attgatgttcttacactctccgcaacacccattccacgtactctgtatctggctttgact
ggtttccgtgatgcaagtttaatgtctacaccaccacctgaaagagttgctgtaaagaca
tatgtgtcagtatttagtaaagaaagggctctatcagctatcaagtttgagctgcagcgt
ggcggtcaagttttctatgtcgtacctcgaataaaagcaatagacgatgtgttgcatttt
ctcaaggactctctgccggatgtaccaattgatgttgctcatggaaagaaagtgtcaaag
accatacaactagctatggaaaaatttgcttgtggagaagtcaaaattcttgtctgcaca
catatcattgaaagtggaatagatattgcaaatgctaatacaatgattgtccagtatgct
gaactatttggactcgcgcagctgtatcagttacgaggaagagtaggacgatcaggcaga
gaaggttttgcatacctcttctacactgataagtctttgctctcaagggttgcaatggat
agacttggagctatcaaagagcattcagaccttggtcaaggtttccatgttgcagagaag
gatatgggtattagggggtttggaagcttgtttggtgagcaacaatctggagacgttgca
aatgtcggcatcgatctattttttgatatgctttttgatagcttgtcaaaggttgataaa
ttttgtcttgtacccgttccttacaaagatgttcagctggatataaacatttctccgcat
ctctcctctgaatatataagttaccttgaaaatccagttgaattgctcaatgaagcagca
aaagctgcagagaaagatctatggactttaatacaattcacagaagaccttcgtcgacga
tatggaaaggagccccgtgatatggagttgctattgaagaagctctatgtaaggcggatg
gcagcagatcttggtatcagtcaggtatatccatctggaaaaattatcctcatgaaaaca
aacatgaacaagaaggtatttaggctcatgacagaagcaatgacttctgaagcatatcga
aattccctatcatacgctggaaaggaaattaaggctgaactcctcgtcagtttgccagac
acactaattctgaactggcttttccactgcttagcagactgctatgctgtaataccagcc
cttgtgaagtactag
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