Phragmites australis (common reed): 133901178
Help
Entry
133901178 CDS
T10575
Name
(RefSeq) probable galacturonosyltransferase 4
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00520
Amino sugar and nucleotide sugar metabolism
paua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
133901178
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
paua01003
]
133901178
Enzymes [BR:
paua01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
133901178
Glycosyltransferases [BR:
paua01003
]
Polysaccharide
Structural polysaccharide
133901178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
ALKL1_2
Motif
Other DBs
NCBI-GeneID:
133901178
NCBI-ProteinID:
XP_062198440
LinkDB
All DBs
Position
20:complement(4740278..4744176)
Genome browser
AA seq
714 aa
AA seq
DB search
MSAAARGRRLRGAALLLLLASVLAPLVLYGGSPVSVAPLPDSTAASGAFDREDASNLVWP
HVATSEVSLARDLTIERLGEHKNRVLSATDHWQVVDAASRSHASGKSDASVVREEPDSRN
ADEEDARVISGNDNARLGQNGMIKEVVRTEGNADGFGEPRDIKEAGEQNGKGFGIELPHA
IDVELKDGSGEAGKNNISAMHTIGNLNSSSNEESTVHRLSEQSRDATTPREYQTRARNSN
AARRATNSSAGQSTSPDATICIIKDQLTRAKTYLGFVASRGNHGLARELRARMRDIQRAL
GDATSDRQLPQNVHSRISVMEQTLVKVGKIHDSCSGAVNRLRTVLHSTEQQLQSQKRLAN
YLGQIAAKSLPKGLHCLTLRLTNEYYSTNSKNRDFPYMEKLEDPKLYHYALFSDNVLAAA
VVVNSTLVHAKKPENHVFHIVTDRLNYAAMKMWFLANPMGKTAIQVQNIEEFTWLNSSYS
PVLKQLESRFMIDYYFRSGHARPDENPKFRNPKYLSILNHLRFYLPEIFPKLNKVLFLDD
DTVVQRDLSALWLIDLKGNINGAVETCRETFHRFDKYLNFSNPLIAKNFDPHACGWAYGM
NMFDLSEWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNHTFPLDRSWHQLGLGY
NPNVNEKDIRRASVIHYNGNLKPWLEIGLPKYRKYWSTYVNFVQVFLRECNINP
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggcggcgcggggccggcggttgcgcggggccgcgctgctgttgctcctcgcc
tcggtgctcgcgcctctcgtgctctacggcggctcccccgtctcggtcgcgccgctcccg
gactccaccgcggcgagcggcgcgttcgatcgggaggacgcgtcaaatctggtgtggccg
catgtggctacatctgaggtgtctctggccagagatttgacaattgagaggctaggggag
cacaagaaccgggtgctatctgcaactgatcactggcaagtggttgacgcagcgagtagg
agccatgcatctggaaaatcagatgctagtgtagtgagggaggagcctgattcacggaat
gcggacgaggaagatgcacgggttatttcgggaaatgacaatgctcgtctgggacagaat
ggcatgatcaaggaagttgtcagaacggagggaaatgcagatggatttggtgaacctagg
gatatcaaggaggctggagagcagaatgggaaagggtttgggatagagttgccgcatgca
attgatgtggagctcaaggatggatcaggtgaagcaggaaagaataacatttctgcaatg
cacactattggaaacctgaattcatcttctaatgaggaaagcactgttcatagattatct
gaacaatctagagatgctactacccccagggagtatcaaacaagggcgaggaacagtaat
gctgctcgtcgcgcaacgaatagtagcgctggtcaatccacatcaccagacgcaacaatc
tgcatcatcaaggaccagttgacaagagcaaagacatatcttggatttgttgcttctaga
ggcaatcatggcttggcaagggagctccgtgcacgtatgagggatatacaacgagcactt
ggtgatgcgaccagtgatcggcagctacctcagaatgtccacagcagaattagtgtaatg
gagcagacactggtgaaggtcgggaaaattcatgatagttgttcaggtgctgtgaacagg
ctccgtacagtccttcactcaacagagcagcaactccagtctcaaaaaagactagctaac
tatctaggacaaatagcagcaaaatctctacccaagggtctccattgccttacgctgcgg
cttacaaatgagtattattccaccaactcaaagaatagggattttccatatatggaaaag
ctggaagaccccaaactctatcactacgccttgttttcagacaatgtattggctgctgca
gtggttgttaactccactcttgttcatgctaagaaacctgaaaaccatgtcttccacatt
gtcacggataggcttaactatgctgcaatgaaaatgtggttcctggctaatcccatgggt
aaaactgctattcaggttcagaacattgaagagttcacgtggttaaattcaagctacagt
cctgttctgaagcagctagaatcccggtttatgattgattactacttcagaagtgggcat
gctaggcctgacgagaatcccaagtttcggaaccccaagtacttgtcaattctcaatcat
ctgaggttctatctccctgagatcttcccaaagcttaacaaggtgttatttctagatgac
gatactgtagtgcagcgggacctcagtgcactttggttgatagatctcaaaggcaatatt
aatggtgctgttgagacctgtagagagacattccataggtttgataagtaccttaacttc
tcaaatcctcttattgccaagaactttgatccacatgcatgcggttgggcttatggcatg
aacatgtttgatctgtctgagtggagaaagcaaaacatcactgaggtctaccacacctgg
cagaagttgaatgaaaacaggctattatggaagctaggtaccctccctgctggccttgta
actttctggaaccatacgttccctcttgatcgttcgtggcatcagttgggacttgggtac
aacccaaatgtcaacgaaaaagacatcaggcgggcgtctgtgatccactacaatggaaat
ctgaaaccctggcttgagattggattgcccaaataccgcaagtactggtcaacgtatgtc
aatttcgttcaagtatttctacgggagtgcaatataaatccctga
DBGET
integrated database retrieval system
