Phragmites australis (common reed): 133901320
Help
Entry
133901320 CDS
T10575
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
paua03036
]
133901320
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
133901320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
133901320
NCBI-ProteinID:
XP_062198619
LinkDB
All DBs
Position
20:complement(356261..362084)
Genome browser
AA seq
967 aa
AA seq
DB search
MITEKPSWIRHEGLQIFSIDIQPGALRFATGGGDQKVRIWSMKSVDKNNSNDDSSQRLLA
TIRDHFGSVNCVRWAKHGRYLASGSDDQAILIHERKAGSGTSEFGSGEPPDVENWKVVMT
LRGHTADVVDLNWSPDDSTLASGSLDNTVHIWNMTNGICTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHKTEGHWAKSLGSTFFRRLAWSPCGHFITTTHGFQKPR
HSAPVLERGEWTATFDFLGHNAPVVVVKFNHSMFRKHFSNGQDTKAASAGWANGASKTST
KEQQPYNIIAIGSQDRTITVWTTASARPLFVAKHFFSQSVVDLSWSPDGYSLFACSLDGS
VANFHFEAKELGYRLSDSELDELKRSRYGDVRGRQSNLVESPAQLLLEEASAKQSAVKKG
TSIVQQIQGPPKVSADVPNPAPVVQNQKAPEALPEEEKKTASPAADDINKVTRLSSPVKQ
REYRRPDGRKRIIPEAVGFPSNQDSIPNHSQNQVVDFSSLDQRMNGTRPSYGSSGNCNNC
GVRDRSGVTARVNITESLVIQKASTGAGNDGRLSVEHTGSVVPGSLNSCSPLSIHVSNKR
DNEDSLPVCLEAKPVERAAGDMIGVGGAFSTKETEIRCTRGTEALWSDRISGKVTVLAGN
ANFWAVGCEDGCLQVYTKCGRRAMPAMMMGSAAVFIDCDDCWKLLLVTRRGLMYIWDLHN
RTCILQDSLASLVASPDEPSAKDAGTVKVISAKFSRCGSPLVVLASHHAFLYDMSLKCWL
RIADDCFPASNFASSFSFPQGGELGKLQIDIGKFMARKPIWSRVTDDGFQTRAHLETQLE
ASLALKSPQEYRQCLLSYIRFLAREADESRLREVCESFLGPPMGTIGSASSTNPKSPAWD
PDVLGMKKHKLLREDILPSMASNRKVQRLLNEFMDLLSEYEATETKADPMDVAPQPATEA
NDNVNTS
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgattaccgagaagcccagctggattcgccacgagggcctgcagatcttctccatcgac
atccagcccggcgccctccgcttcgccaccggcggcggcgaccagaaggttcgaatatgg
agcatgaaatcagtggataagaacaattccaacgatgattccagccaaaggttgctagct
acaatccgagaccattttggatcagtaaactgcgtgagatgggccaagcatggccgctat
cttgcttcaggatcagatgatcaggctatccttattcatgagagaaaagctggttctgga
acatctgagtttgggagtggagaacctccagatgtagaaaattggaaggtcgttatgacc
ttaagagggcatactgcggacgtggtagatcttaattggtcccctgatgattcaacattg
gctagcggcagcttggataatactgttcatatatggaacatgaccaacggcatttgcacc
gccgtcttgcgagggcattccagcttggtcaaaggggttacctgggatcctattggttct
tttatcgcaagccaatcagatgataagactgttataatatggcgtacaagtgactggagt
cttgctcacaagacagaaggccattgggcaaaatctcttggttcaacgttttttaggcga
cttgcttggtcaccttgtggccatttcataactacgactcacggtttccagaaacctagg
cattcagcccctgtgcttgaaagaggcgagtggactgcaacttttgactttctagggcat
aacgcgcctgttgtggtggttaagtttaatcactcaatgttccgtaagcatttctcaaat
ggtcaagacacaaaggctgcatcagctggatgggccaatggagcatcaaagacatcaaca
aaagaacagcaaccgtataacataattgctatcggaagtcaagacagaactattactgtt
tggacgacagcaagtgcgcggccattatttgttgctaagcattttttctctcaaagcgtg
gttgatttatcttggagccctgatggttattcactttttgcctgctccttggatggatca
gtcgccaactttcactttgaagcgaaggagcttggatacaggttaagtgattctgaactg
gatgaattgaagaggagtagatatggtgatgttagaggacggcaatcaaaccttgttgaa
agccctgcacagttgctgctagaagaagcatcagcaaagcaatcggctgtcaaaaagggg
acttccattgtccagcaaattcaaggacccccaaaagtttctgcagatgtgcctaaccca
gctcccgttgtgcaaaatcagaaagctccagaagctttacccgaagaagagaagaaaaca
gcaagtcccgctgctgatgatataaataaagttacccggttatctagtccagtgaagcag
agagaataccggcgtcctgatggccggaaaagaataatcccagaggcagttggatttcct
tccaaccaggatagcatacccaaccattctcagaatcaggttgtggatttttcatcccta
gatcagcgaatgaatggaacaagaccatcttatggtagtagcggtaactgtaataactgt
ggtgttagggatcgctctggtgtcacagcaagggtgaacattaccgaaagtcttgttatt
caaaaagcttcaaccggtgctggcaatgatggaagactgagtgtggaacacactggatct
gtagttccaggctctttgaactcctgctctccgctttctatccatgtatcaaataagaga
gacaatgaggattctttgccagtctgccttgaagcaaagcctgtagaacgtgctgcaggt
gatatgattggtgttggcggtgccttttcaacaaaagaaactgagataaggtgtacaaga
ggaacagaagctctttggtcagatcgtatctctggaaaggttactgtgttggcaggcaat
gcaaatttctgggctgttggttgtgaagatggttgcctgcaggtttacacaaaatgtgga
agacgagcaatgccagcaatgatgatgggatctgcagcggtttttatagattgtgacgac
tgctggaaattgcttcttgtcacaaggagaggtctaatgtacatatgggacctccataac
aggacctgcattttgcaggattctttggcttctttggttgcatccccagatgagccatca
gcaaaagatgctggtacagtaaaggttatatctgctaaattctcaagatgtggctcacct
ttagttgttcttgccagccatcatgcttttctttatgacatgagcctgaagtgctggcta
cggattgccgatgattgttttccagcatcaaattttgctagctcatttagtttccctcaa
ggtggagagctaggcaaattgcagattgatataggcaagttcatggctagaaagcctatc
tggagcagagttacagatgatgggtttcagacgcgtgcccatttggagacccagctggaa
gcttctttggctttgaagtcaccacaggagtaccgccaatgcctcctgtcctacatacgg
tttttagctagagaagcagacgaatctcgtcttcgtgaagtttgtgagagcttcctaggt
cctccgatgggcacgattggttctgcgtcatctacgaatcccaaaagcccagcgtgggat
cctgatgttcttggaatgaagaagcacaaacttcttagggaagatatccttccttcaatg
gcatcgaaccggaaggtccagcggctgctcaatgagttcatggacctcctgtcagagtat
gaagctaccgagaccaaagctgacccgatggatgtggcgccgcaaccagcaacagaagcc
aatgacaacgtgaacacgtcgtag
DBGET
integrated database retrieval system