Phragmites australis (common reed): 133901377
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Entry
133901377 CDS
T10575
Name
(RefSeq) protein HASTY 1-like isoform X1
KO
K14289
exportin-5
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133901377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paua03016
]
133901377
03036 Chromosome and associated proteins [BR:
paua03036
]
133901377
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
133901377
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
133901377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
bPH_4
CarD_C
Motif
Other DBs
NCBI-GeneID:
133901377
NCBI-ProteinID:
XP_062198730
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Position
2:complement(16885140..16899487)
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AA seq
1199 aa
AA seq
DB search
MAADPAAAAAAAAISAVMDWRSSPDARASAFAYLESVKSGDVRALASVSFLLVRKDQTLE
IRLHGFKMLQHLVRLRWEELAAAERNEFANLTINLISEVVGPHEEWALKSQTAALVAEVV
RREGVPLWNTLLPSIVSLSNRGPIEAELVAMILRWLPEDITVHNEDLEGDRRRSLLRGLT
DSLPQILPLLYSLLEKHFVAALSEHAKHQMDLAKQHAGTVTAVLNAVNAYAEWAPVTDLA
RFGLIHGCGSLLSYSDFQLHACEFFKVICQRKRPVDVAVAEYDATMCNIFQVLMNTSQQF
LTRSKMQPSAIDESEYEFATCVCETMVALGSSNMQCILADGATTFHFLQQMLEYYQHYRV
VLHFHSLLFWLVVLREPSKAKSVARVSGDNSATGNSASTGDCSMEKEKKGVSVFVTDEIY
STILDISFKKMLKNSASASSGLVELWSEELEGKSDFSNYRTKLLDLIKVIASQRPVITAA
SVVQRVNVVFGDTNQATKSPQDLDAMEGAQLGLEAVVSAIFDGSVDYGKTDHETKSQIHN
IFEGLLQQLLSLKWTEPNLAVIHGHYLDALGPFLRHYPDAVASVVNKLFELLTSLPITFQ
DSSNNSRLARLQICSSFIRISRAADKALLPHMKNIADTMAYLQGEGRLLRGEHNHLCEAF
LVMASSAGIQQQQEVLAWLLEPLNKMWTQVEWQTAYLSDPSGLTNMFGDSQFMWSIYHTV
TLFEKALKRSGTKKSTATPQAPTAMAVPGNLHPMSSHLPWILPPLLKLLRCIHALWAEPF
AVSQTEEIKAAKSMTVAEQASLLGVTGKLTKVQVAPADGLLDAQREGESKENNIRNWLRG
IRDSGYNVLGLAATLGEAFYGCIEGSSATLALMENVQVMEFRHLRQLIHLVIIPFVKYCP
AELWQVWLLNLLQPLFVHCQQALHYSWSGLLHEGRAKVPDSIGNLSGSELKVEVMEEKLL
RDLTREVCSVLWALASPSLNSGLPSLEQLGPSNRMDSSLKNLESFASSSLIGFLMVHIGT
ALPALRISVEVFTWTDSDAVTKVISFCGALIHLAVATNQAELRQFVAKDLFSSIIHGLSV
ESNSIMSADLVGLCREIYVYLSNRDPAPRLVLLSLPHIKKEDLLAFDDSLSKTASPKEQK
QHMRSLLLLATGNKLRALAAQKTTNVITNVTTRNRSSTTHHGSNAEEDDHIGLAALSPT
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacccagccgctgcggcggcggcggccgcgatctccgctgtgatggactgg
cgctcctcccccgacgcccgcgcctccgccttcgcctacctcgaatcggttaagagtgga
gacgtccgagcattggcgagtgtatcatttctcttggtccggaaggaccaaacattggag
atccgcttgcacgggttcaaaatgttgcagcacttggtgagattgaggtgggaggaactc
gctgctgcagagcggaatgaatttgctaatttgactattaatttgatatcagaggttgtt
ggaccccacgaggagtgggctttgaagagtcaaacagctgctttagttgcagaggtagtt
cgaagggagggagttccactatggaatactttactcccatctattgtttctctgtctaat
cgtggtcctatcgaggctgagttagttgccatgattctaaggtggcttccagaggatatc
actgtccataatgaagatttagagggtgatagacggagatcgctgttacgtggccttact
gactcacttccacaaattttgccgctgttatattctctacttgagaaacattttgttgct
gctttaagtgagcacgcgaaacatcaaatggacttggctaaacaacatgcagggacagtg
acagctgttctgaatgctgtcaatgcatacgctgaatgggctcctgtgacagaccttgcc
agatttggtttaattcacggatgtggatccttgctttcttacagtgattttcaactccat
gcttgtgagttttttaaagtaatatgccagagaaaacgacctgtggatgttgcagttgct
gagtatgatgccacaatgtgcaacattttccaggtgttgatgaacacttcacaacaattt
ttgaccagatctaagatgcagcccagtgctattgatgaaagtgaatatgagtttgcaacg
tgtgtttgtgagacaatggttgctctaggatcttctaacatgcaatgcatactagctgat
ggagctacgactttccacttcctacaacaaatgctggaatattaccaacattacagggtt
gtacttcatttccactctttattattttggctggtggtattgagagaaccatcgaaagct
aagtctgttgcacgtgtttctggtgataactctgctactggtaattctgcatccactggt
gactgttcaatggaaaaggagaagaaaggggtgtcagtatttgttactgatgaaatatac
agtacaatattggacatctcgttcaaaaagatgctcaagaacagtgcaagtgcatcctcc
gggttggtagaactatggagtgaagagcttgaggggaaaagtgattttagcaactaccgc
accaaattgttggatctcattaaagtcattgcttctcaaagacctgttataactgcagca
agcgttgtacagagagtaaatgttgtttttggggacactaatcaagcaactaaatcccca
caggatcttgatgcaatggaaggtgctcaactggggcttgaagcagttgttagtgccata
tttgatggctcagttgattatggaaagactgatcacgagacaaaatcccaaattcataat
atttttgaaggcttacttcagcagcttctttctttaaagtggacagaaccaaaccttgca
gttattcacggtcattatttggatgctttgggtcctttcctgagacattatccagatgca
gtcgccagtgttgttaataagctttttgaactgttgacatctctccccattacatttcag
gactcatcaaacaattcccgccttgccagattgcagatttgctcgtcatttattcgtata
tcaagagctgctgataaagcacttctgcctcacatgaagaacattgctgataccatggct
taccttcaaggagagggtcgcttactacgtggtgaacataatcacctatgtgaagcgttt
cttgtgatggcatcctctgctgggattcaacagcaacaggaagtcctggcctggttactt
gaacctcttaacaaaatgtggacacaagtggaatggcaaactgcatacttgtctgaccca
tctggtttgacaaacatgtttggtgatagccaatttatgtggtcaatttaccacacggtt
acattatttgaaaaggcactaaagagaagcggaaccaaaaagtctacagcaactccacaa
gcacccaccgcaatggcagtacctggtaatctgcatccaatgtcttcacatctaccatgg
attctgcctcctctcttaaagctgctgcgatgcatacatgcgctttgggctgagccgttt
gctgtgtctcagacagaggaaatcaaagcagcaaaaagcatgactgttgcagagcaggct
agccttctaggagtgacaggtaaactcaccaaagtccaggttgcacctgctgatggattg
ctggatgctcaaagagagggtgagtccaaggaaaataacataagaaactggctacgtggg
atccgtgacagtgggtacaatgttttgggattagcagctactcttggggaagcattctat
ggatgcatagagggttcctctgccacccttgctcttatggagaatgtgcaagttatggag
tttcggcatttgcgccaacttatccaccttgttattattccgtttgttaaatattgccct
gctgaactatggcaagtgtggctactgaaccttttgcagccattatttgtccactgtcag
caagctcttcattattcttggtccggtcttcttcatgagggccgggctaaggttccagac
agcattggtaatctttctgggtctgaactgaaggtagaggtaatggaagagaagctgcta
cgtgacttgactcgcgaagtatgttctgtgctttgggctttagcatcacctagcttaaat
agtggacttccgtccttggaacaacttggaccttccaaccggatggattcttctctcaag
aatctggagtcctttgcttcaagttctctcattggatttcttatggttcatattggcact
gcccttcctgcattgaggatatcagttgaagtgttcacttggacagatagtgacgcagtg
acaaaagtcatctccttttgtggtgcgctgattcatctcgctgttgctacaaaccaggct
gagttgagacagtttgttgcaaaggatctattttcttctataatacatggtttatctgtt
gagtccaattcaatcatgagtgcagatcttgttggactttgtcgtgagatatatgtctac
ctgtctaatagagatcctgcacctaggctggttcttctgtccctcccacacatcaagaag
gaagatttgctagcctttgatgactccttgagtaaaactgctagtccaaaagaacaaaag
caacatatgcgtagcttacttctgctggctacagggaacaaactaagagctcttgctgct
cagaagacaactaatgtgattaccaatgttacaactcgaaataggagctctaccacgcac
catggatcaaatgccgaagaagatgaccatattggattggccgcattatcaccaacgtga
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integrated database retrieval system
