Phragmites australis (common reed): 133901390
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Entry
133901390 CDS
T10575
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
paua Phragmites australis (common reed)
Pathway
paua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
133901390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paua03400
]
133901390
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
133901390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
Motif
Other DBs
NCBI-GeneID:
133901390
NCBI-ProteinID:
XP_062198743
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Position
20:976591..985440
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AA seq
1252 aa
AA seq
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MKIIKRLPKNVHSSLHSSIILSDLPRVVEELMYNSIDANATKIDIEVNVRACYVKVADDG
CGITRDELVLLGEKYATSKFHNGMGFGELSSRTFGQNGEALASLSDISVVEVRTKARGRP
NSYCKIIKGSKCLHLGIDNQREFVGTTVIVRELFYNQPVRRKQMQSSERRELYNVKKCVL
QIALIHPQVSLRLLDIDSEDELLYTTPSSSPLPLISNSFGDDVSRCLHEIAISDQDWVLS
GHISAPTDLFCTKDFQYLYINSRFVNRNPIHNMLNNLAASFQSSLIKRNEEIDVRSRKRQ
KTDVYPAYLLNLCCPRSSYDLHFEPTKTIVEFKDWQTVLFFFEQTFTNYWKKHALQSPED
KASADGTHVPLTNDVKLNQGLLKHHNVQNKEDYVEFQSTQQKNAVRGTNWDMNATAALKD
LRHISFDTEPSIRHVSFSERITNTSQHNDNVATIDFKTGYKQMHSPESGISRWLEDGTSQ
LDDDLSSVNPTAWKRRRTEGIFHEYAYSGNFGMSEDVPTEGFLPHEQESELIGPGLEIQE
SCFRALSRPTRMTCDLVQNQTNVKEHTSGWDGFYVEFDKLNEDCLLNEATETITDISYPE
MSQLSDRFYHDDGSSSTCRGFCRVLRKCSTSKKLGNAAGRVEGFDADTVSQMNFPDIHAP
WDSDFMDRSSFKYTHHHFPHPFSLADTPCSHARTDLKFHRRSNKSFGFWNCRKFDSDLRF
TLDKFNNDSSIICEGTKHLDNFDNETQLLKYFNNDCCSTDQFGSEDDLITWKSKFDVRLP
DDNSPEKSANGCHVNVPSSQMANGSTLTQDPLNQHNFGCDQRYRPSKGNRSHSAPPFYRG
KRKFSRLNEPLTTDGDKDICINNPEDNAPTPVDISPMSAAQPIPETDSSECRDLNFSSNG
FVKMCEDACSDGLEDSSAQIKWRDDSGQHTALELPHSPFRCYDDVLSISSGTLHLSCSSL
VPECVDKNCFDEARVLLQLDKKFIPVISGETILLVDQHAADERIRLEELRNKVLSEEGHG
ITYLDSEEELVCHIYLSAFAALCQYNICEHVFILRCVVFYPICFQSLPETGFQLFQKYAE
QIQKWGWIINSCSNSSESFKKNMNILRRQARLVTLVAVPCILGVNLTGKDLMEFIQQLDE
TDGSSAIPPAVLRILNFKACRGAIMFGDPLLPSECCLIIEELKATSLCFQCAHGRPTTVP
IVNIASLHYELARLEMLSGRQTETWHGLEHQGPNLERAQTRLKRLRKLRRGL
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcataaagcgcttgcccaagaacgtccatagctccctgcactcaagcattatt
ctgtctgacctaccaagggttgttgaggagttgatgtataatagcattgatgcaaatgcg
accaagattgacatcgaagtcaatgttagagcatgttatgtaaaagtcgcagatgatggt
tgtggtattactcgagatgaattagttctcttgggagaaaaatatgcaacatccaagttc
cataatggcatgggtttcggggaacttagttctagaactttcggacaaaatggagaagca
ctcgcgtcactttctgatatctctgtggttgaagttaggacaaaagctcgtgggagacca
aattcatactgcaagataataaaggggtccaaatgcttacatctaggaatagataaccag
agggaatttgtcggcaccacagttattgttcgggagcttttttacaatcaaccggtacgg
aggaaacaaatgcaatctagtgagagaagagaattatataatgttaagaagtgtgtcctg
caaattgcgcttattcatccacaggtttcgctcagacttcttgatattgacagtgaagat
gagttgctgtacacaactccttcatcatcccctttgccccttatatcaaatagttttggg
gatgatgtctctagatgtcttcatgaaatagcgatctctgatcaggactgggttctttca
gggcacatatctgcaccaacagatttgttctgtacgaaggatttccaatacttgtacatc
aactcaagattcgtgaatagaaacccgatccacaatatgcttaataatctggcagctagt
tttcagtcttctttgataaagaggaatgaagaaattgatgttcggagcaggaagaggcag
aagactgacgtctaccctgcatatctgctaaacttgtgctgccctagatctagctatgat
ctacattttgagcctacaaagaccattgtagaattcaaggattggcaaactgtcttgttt
ttctttgaacaaactttcacaaactactggaagaagcatgcactgcaatcaccagaagac
aaagcttctgctgatggtacccatgtgcctcttacaaatgatgtgaaactgaatcagggc
ctcctaaagcatcataatgtgcagaacaaggaagactatgttgaattccaaagcactcag
cagaagaatgcagtcagaggcaccaattgggatatgaatgccacagcagcactaaaagac
ttgcgccacatttcgtttgatacggagccatccatacgtcatgtctccttttcagaaagg
atcactaacacatcccaacacaacgacaatgttgccactattgatttcaagactgggtat
aagcaaatgcattctcctgaaagtggcatttctcggtggttggaggatggtacttctcag
ttagacgatgatctttcgagtgttaatccaactgcttggaaaagacgaagaacagaaggt
atatttcatgaatatgcatattctggtaattttggaatgtcggaagatgtaccaactgaa
ggttttttacctcatgaacaagaatctgagttgattggtccaggacttgaaatccaagaa
tcttgcttcagggctctcagtagaccaactagaatgacctgtgatctcgttcaaaatcaa
accaatgtaaaggaacacacatcgggctgggatggattctatgtcgagtttgacaaatta
aatgaagattgcctactcaatgaagccacagagacaatcactgatatttcttaccctgag
atgtcacagttgagtgatcgattttatcatgatgatggtagcagcagcacctgcagaggc
ttctgtagagttttgagaaagtgcagcaccagtaagaagttagggaatgcagctggacgt
gttgaaggctttgatgctgatactgttagccagatgaacttccctgatatccatgctccg
tgggacagtgacttcatggatagatcctccttcaagtatactcaccatcattttccccat
ccattctcgttggctgatacaccttgcagtcatgcaaggactgacttgaaatttcacagg
agatcaaataaaagctttggtttttggaactgcagaaaatttgacagcgatcttagattt
actttggacaaatttaacaatgattcgtcaataatatgtgaagggactaaacatttggat
aactttgacaatgaaacacagcttcttaagtacttcaataatgattgttgttctaccgac
cagtttggttctgaagatgatctgataacttggaaatcaaaatttgacgtgagattgcca
gatgataattctcctgagaaaagtgctaatggttgccatgtgaatgtcccttcttctcaa
atggcgaatggcagcacgcttactcaagatccgctgaatcaacacaactttggatgcgat
cagcgatacaggccttccaagggtaataggagtcattctgctccaccattttatagaggt
aaacggaaattctctagattaaatgagccgctgaccacagatggtgacaaagatatctgc
attaacaacccagaagataatgcaccaacacctgtggatatctcacctatgagcgcagcg
cagcctattcctgagactgatagcagtgaatgccgagacctaaatttcagctcgaatggg
tttgtgaaaatgtgtgaagatgcgtgttctgatgggcttgaagattcttctgctcaaata
aaatggcgagatgactctggccagcatacagctttggagttgccacatagtcctttcaga
tgctatgatgatgtacttagcatttcttctgggaccttacatctctcttgtagctcacta
gttcctgaatgtgttgacaagaattgctttgacgaggcaagggttttgttgcagctggat
aagaaatttattcccgtcatatctggggaaacaatcctccttgttgatcagcatgcagct
gatgaaaggatacgtttggaagagctccgtaacaaggttttatcagaagaaggccatgga
atcacttacttggactctgaggaggaattagtatgtcatatttatttgtcagcatttgct
gcattatgtcaatataacatttgtgaacatgttttcatactaagatgtgtcgtattttac
cccatttgttttcagtctctccctgagactgggtttcagttgttccagaagtatgccgag
cagattcagaaatggggttggatcatcaacagttgtagcaattcctctgaatcattcaaa
aagaacatgaacattctgaggagacaagcccgtcttgttactcttgttgctgttccatgt
attttgggtgtcaatttaacagggaaagatcttatggagtttattcagcagcttgatgag
actgatgggtcgtcagctatccccccagcagttctccgtattcttaatttcaaagcttgc
agaggcgcgatcatgtttggtgatcccttgctaccatctgagtgctgtctgattattgaa
gaactgaaagcaacatctctatgcttccagtgtgcccatgggcgcccgaccacggtgccc
atcgtgaacattgcatccctccactacgagttggcgaggctcgaaatgctgagcgggagg
cagacagagacttggcatggcttggagcaccaaggacccaaccttgagcgcgctcaaacc
cgcctcaaacgactgagaaagctacgccgtggcctgtag
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