Phragmites australis (common reed): 133901442
Help
Entry
133901442 CDS
T10575
Name
(RefSeq) probable chromatin-remodeling complex ATPase chain isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
paua Phragmites australis (common reed)
Pathway
paua03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
133901442
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
133901442
RSF complex
133901442
WICH complex
133901442
B-WICH complex
133901442
NORC complex
133901442
BRF complex
133901442
NuRF complex (fruit fly)
133901442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133901442
NCBI-ProteinID:
XP_062198799
LinkDB
All DBs
Position
2:complement(17150817..17158398)
Genome browser
AA seq
1104 aa
AA seq
DB search
MAKPVKYDDDDEISSSAEEEDDQEDQSEADGSGSGEEDEEEAAPPAGEGDGEGQEEEEVD
EEEIEAVTTGTGADDEEDAGAAAAGEGDDESQSTEDDEAVAGDNDDGDDTEHSAGVGKRE
KARLKELQKMKKQKIQEILDTQNAAINADMNNKGKGRLKYLLQQTEIFAHFAKGSQSKEK
KPRGRGRHASKMTEEEEDEEYLKEEEDALAGAGGTRLLSQPSCIKGKMRDYQLAGLNWLI
RLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWIKEIQRFC
PIIRAVKFLGNPEERNHIRENLLQPGKFDVCVTSFEMAIKEKTALRRFSWRYIIIDEAHR
IKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQIS
GENDQHEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDL
EVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLIENAGKMVLLDKLLPK
LKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIDAFNKPGSEKFV
FLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIE
EKVIERAYKKLALDALVIQQGRLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDEDIDR
IIAKGEETTAELDAKMKKFTEDAIKFKMDDTAELYDFDDEKDENKVDFKKLVSDNWIEPP
RRERKRNYSESEYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNNQRLNELYEKEVLYLM
QANQKKDTIDGEDEDQLEPLTAEEQEEKEQLLEEGFASWTRRDFNTFIRACEKYGRNDIK
SIASEMEGKTEEEVQRYAKVFKERYKELSDYDRIIKNIERGEARISRKDEIMRAIGKKLD
RYKNPWLELKIQYGQNKGKFYNEECDRFMLCMVHKLGYGNWDELKAAFRMSPLFRFDWFV
KSRTTQELARRCDTLIRLVEKENQEYDEQERQARKEKRLAKNMTPTKRAAVRNSEGETTP
SNSLKRRRQSLMDDYVGSGRRKRG
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccggtgaagtacgacgacgacgacgagatctcgtcctccgccgaggaggag
gatgatcaggaggaccagtccgaggctgacgggtccggatctggcgaggaggacgaggag
gaggcggcgccgcccgcgggggaaggcgatggggagggacaggaggaggaggaggtcgac
gaggaggagatcgaggcagtcaccaccggcacgggcgccgacgacgaggaggacgccggt
gccgccgccgccggggagggcgacgacgagtcccagtccactgaggacgacgaggccgtc
gcgggggacaacgacgatggtgacgatactgaacattcagcaggagttggaaagcgtgaa
aaagccaggttgaaagaacttcagaagatgaagaagcagaaaatccaagagatattggat
acccagaatgctgccattaatgctgacatgaacaataaagggaaaggacgactgaaatat
cttctgcagcagactgaaatatttgctcactttgcaaaaggaagtcaatcaaaagagaaa
aagccacgtgggaggggacgtcatgcatcaaagatgacagaagaagaggaagatgaagaa
tacctcaaagaagaggaggacgcccttgctggtgcaggcggaacacgtttgctttcgcag
ccttcatgcataaagggaaaaatgcgagattaccaactagctggacttaattggctcata
cggttgtatgagaatggtatcaatgggatattggctgatgagatgggccttgggaaaact
cttcaaactatttcactgctgggctatctgcatgaattcagaggcataactggtcctcac
atggttgttgcaccgaagtccactctaggcaattggattaaggaaatccaacgtttttgc
cctattatacgtgctgtgaagttcttgggaaatccagaagagaggaaccatataagggaa
aatttactacagccaggaaaatttgatgtgtgcgtgactagttttgaaatggcaatcaaa
gaaaaaactgcattgaggcgtttcagttggcgctacattattatcgatgaagctcaccgg
ataaaaaatgagaattctcttctgtcgaaaactatgaggctttacaacactaattatcgt
ctcctcatcacaggcactccgctccagaataatctccatgagctttggtctctcctcaac
ttcttgctgcctgaaatattcagctctgctgagacctttgatgaatggtttcaaatttcc
ggggaaaatgatcaacatgaggtggttcagcagcttcataaggttcttcgtccatttctt
cttcggaggcttaaatctgacgtcgaaaagggtttacctccaaagaaggaaaccatactt
aaagttggaatgtctcagatgcaaaagcagtactatcgtgctctactgcagaaagattta
gaggttattaatgctggtggtgagcgcaagcgattgcttaacatcgccatgcagttgcgc
aagtgttgcaaccatccatatttattccaaggtgcagaacctggtccgccttacacaact
ggtgaacatttgattgagaatgcaggaaaaatggttctgttggataaattgctgcccaag
ctaaaggaacgtgactccagagtgcttattttttcacagatgaccaggcttttggatata
ttggaagattatcttatgtacaaaggatatcagtattgccgaattgatggaaatacaggt
ggagaagatcgtgatgcatccattgatgctttcaacaaaccaggaagtgagaagtttgtt
ttcttgctttcaaccagggcaggtggccttggtatcaacctggccactgctgatgttgtg
gttctctatgacagtgattggaatccacaagctgatctgcaagctcaagaccgtgcacat
aggatagggcaaaagaaagaagttcaagttttccgtttttgcactgagtatactattgaa
gaaaaagtgattgagagagcatacaagaagcttgcattggatgctttggttattcaacaa
ggacgattggcagagcagaaaactgtcaataaggatgaccttctgcaaatggtgagattt
ggtgctgaaatggtgttcagttcaaaggacagcaccataactgatgaggacattgaccgt
attatagctaaaggagaagagacaacagcagagcttgatgcgaaaatgaaaaaattcact
gaggatgccatcaaatttaaaatggatgatactgctgaattgtatgattttgatgacgag
aaggatgaaaacaaggttgatttcaagaaacttgttagtgataactggatcgagccacca
agaagagaaaggaagagaaactactctgagtctgagtactttaagcaagcacttcgccaa
ggtgcaccagcaaagcctagggaaccacggattccaagaatgccacacttgcatgatttt
cagttcttcaacaaccaaaggctaaacgaattgtatgaaaaggaagtcctgtaccttatg
caagcaaaccagaagaaagataccattgatggcgaagatgaagatcagttggagcctttg
actgcagaggagcaagaagagaaggagcagttattagaagagggttttgcatcatggacg
aggagagacttcaacacatttattcgtgcatgtgagaaatatggtcgcaatgacatcaaa
agtatagcctctgaaatggaggggaagacagaagaggaagttcaacgttatgctaaagtg
ttcaaggagagatataaggaactgagtgattatgatagaattatcaaaaacattgaaagg
ggagaagcaaggatatcccgtaaggatgagattatgagagccattgggaaaaagttggac
cgctacaagaacccatggttagaattgaaaattcagtatggccagaataaagggaagttc
tacaatgaagaatgtgaccgtttcatgctttgcatggtgcacaaacttggctatggaaac
tgggatgaactgaaagctgcctttcgcatgtctcccttgttccgattcgattggtttgtg
aagtccagaactacccaagagttggctaggcgttgcgacacccttatccgacttgttgag
aaggagaatcaagaatatgatgagcaagaaaggcaggcaaggaaagagaaaaggctcgct
aagaacatgactccaacaaaacgagcagcagtaaggaattcagagggtgagacaactcca
tccaattcgctcaagaggcgacggcagtcccttatggatgattacgtgggctcgggaagg
cgtaaacgagggtga
DBGET
integrated database retrieval system
