Phragmites australis (common reed): 133901529
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Entry
133901529 CDS
T10575
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1-like
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133901529
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
paua01007
]
133901529
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paua03016
]
133901529
Enzymes [BR:
paua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
133901529
Amino acid related enzymes [BR:
paua01007
]
Aminoacyl-tRNA synthetase
Class II (A)
133901529
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
133901529
Prokaryotic type
133901529
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
DUF4131
Desulfoferrodox
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
133901529
NCBI-ProteinID:
XP_062198861
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Position
2:complement(17481772..17485439)
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AA seq
561 aa
AA seq
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MAADAATAAMAAASLCDDLEPATTRTRIRDVLAAGASRAGDRVVVGGWVRTGREQGRGAF
AFLELSDGSCAATLQVIVDAAVHPLARLTATGTSVLVEGEIKEPPEGTKQNVEVKVSRVL
EVGEVDAAAYPLPKGKVKLTLEKLRDVVHLRSRTNTIGAVARIRHQLAFATHKFFNENGF
LYIHTPIITTSDCEGAGEMFQVTTLFSQAEKNEKELKENPASTDSEIEAAKVLVQEKGDA
VAQLKAANASKQDISAAVAKLMRAKENVSKLDERSKLKPGIPHRDDGTIAFENDFFKRQA
FLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLSEFWMVEPEIAFANLQDDMNCA
EKYVQYLCKWLVDHCREDMEFMVKNYDKSAIERLELVASTSFVRISYTKAVELLKNVTGK
RFENKVEWGIDLASEHERYLTEEIFKKPVIVYNYPKGIKAFYMRLNDDQKTVAAMDVLVP
KVGELVGGSQREERLDVLKQRIQDAGLPLEPYEWYLDLRRFGSVKHSGFGLGFERMILFA
TGMENIRDVIPFPRYPGRADL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgacgccgcgacggcggcgatggccgcggcctccctctgcgacgacctggag
cccgccactacccgcacccgcatccgcgacgtcctggccgcgggcgcctcgcgcgccggg
gaccgcgtcgtggtgggtgggtgggtccgcacgggccgtgagcaggggaggggcgccttt
gcgttcctcgagctcagcgacggctcctgcgccgccacgcttcaggtcatagtcgacgcc
gccgtgcacccactcgcgcgcctcaccgccacgggcacctccgtgctcgtcgagggcgag
atcaaggagccgcccgaggggaccaagcagaacgtggaagtcaaggtcagccgcgtgctc
gaggtcggagaggtcgacgccgctgcctacccgctgcccaagggcaaggtcaagctcacg
ctcgagaaactcagggacgtcgtccacctccgctcgcgcaccaacacgattggagcagtt
gctagaattaggcaccagttagcctttgcaacacacaagtttttcaatgagaatggcttt
ctctatatacatacaccaataataactacaagtgactgtgagggtgctggtgagatgttc
caagttacaactttgtttagccaggctgaaaaaaatgagaaggaattgaaagagaaccct
gcatcaacagattctgaaatcgaggcagctaaagttcttgtccaggagaaaggagatgca
gttgcacaacttaaagctgcaaatgctagcaaacaagacatatcagctgctgttgctaag
cttatgagggcaaaagaaaatgtttcaaagctggacgaaaggtctaaattaaagcctggg
attccacacagggatgacgggacaatagcttttgaaaacgatttcttcaagcgtcaagcg
tttttgactgtgtctggacagcttcaggttgagacatatgcctgtgctctgagtagtgtg
tatacttttggaccaacattccgggcagagaactcacatacgtcacgacatttgtcagag
ttttggatggttgagccagaaattgcatttgcaaacttgcaggatgatatgaactgtgca
gaaaaatatgtacaatacctttgcaagtggctggttgatcattgccgggaagatatggaa
tttatggtgaaaaattatgataagagtgcaatcgaacgtctagagcttgttgcctcaact
tcttttgtgcggatttcatatacgaaggctgtggagctcttgaaaaatgttactggcaag
aggtttgagaacaaagttgaatggggaattgatttagcatctgagcatgaaaggtatttg
accgaagagatatttaagaagccagtgattgtctataactatccgaaaggaataaaagca
ttttatatgaggctcaatgacgatcagaagacagtggctgcgatggatgttcttgtgcct
aaggttggcgagttggttggtggaagccaaagggaggaacgtctagatgttctcaagcag
agaatacaagacgctggcttacctttggagccctacgaatggtacttggacctccgccgc
tttgggtctgtaaagcacagtggctttgggttgggctttgaaaggatgattctatttgcc
actggtatggagaacatcagagatgttatacctttcccaaggtacccagggagggctgat
ctgtga
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