Phragmites australis (common reed): 133901580
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Entry
133901580 CDS
T10575
Name
(RefSeq) KH domain-containing protein HEN4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133901580
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133901580
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
133901580
NCBI-ProteinID:
XP_062198935
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Position
20:complement(3741326..3750651)
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AA seq
653 aa
AA seq
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MEIFTPAGAASSSSSSTPSTKRSTTMLRLLCPSSRASALRPARDLHVDQPPVGDEAVLTI
SGRDAPDAAVRAWERVVGHRVGGDEAGGGEEGEREVAGAVGCRMLAAGGQVGCVLGKGGK
TVERMRQESGAQIRVFRNREQLPPCAAPGDELIHISGSFPQVRKALLAVSTCLQDNPRPD
TSNIPMGRSFGPPGGGTGCPPGIDPHSQRSYLPPHMPDYHTRNYSSNAGAPGPRFFFEQE
IVFRMIILNDMVGSIIGKGGSTIRALQSETGASIKIIEPIADSDERAVAISARENSDMMH
SPAQDAVLRVHSRISEASVDKSSSAPARLLVPSQHIGCLLGKGGSIIAEMRKVTGASIRI
FANEQIPRCAQRNDEMVQDSDRIFSESFSGCRMEEFGAFITKSNPSDSTSFPPILIFTVT
GSFQSIQDALIHITGRIRDIIIPKPHPSGGMPPYPPVGNIPLHQSRQEPAPPHPSGGMPP
YPMHSFRADTPMGPFDTGDHRRPPPHSMEHMGADRMSYSYGCEQGGPQPFLEQPPPRTWA
PEAPKTNSEALRNMPDAVPATDFRKGAVASENQVATPTSTTEVVIPCKYVSFVCGTNGSD
LEEIKKMSGASITVHDPKPGDTNSTIVICGDPEQTKKAQSLIHAFIFCGLYQT
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcttcaccccggccggcgccgcctcctcctcctcctcctcgaccccctccacc
aagcgctcgacaaccatgctccgcctgctctgcccctccagccgcgcctccgccctccgc
cccgcgcgggacctccacgtggaccagccgcccgtgggggacgaggctgtgctcaccatc
tccgggcgggacgcccccgacgcggcggtgagggcgtgggagcgcgtggtgggccacagg
gttgggggcgacgaggcggggggaggggaggagggggagagggaggtggcgggcgcggtg
ggctgccggatgctggccgccggcgggcaggtcggatgcgtgctggggaagggcggcaag
acggtggagcggatgaggcaggagagcggcgcccagatcagggtgttccggaacagggag
cagctgcctccatgcgctgcgccgggagacgagctcatccatataagtgggagctttcct
caagtacggaaagcactgttagcagtttcaacctgcctccaagataatcctaggccagac
acaagcaatattccaatgggaagatcatttgggcctccaggtggtggaactggttgtccc
cctggcatcgatcctcattctcaaagaagttatttaccaccacacatgcctgattaccac
acaaggaattattcaagtaatgctggtgcccctggtcctagattcttttttgaacaagag
attgtgttcaggatgataattctcaatgatatggtgggcagcataattggaaaaggtggt
tccactatccgtgcattgcaaagtgaaactggtgcttctattaagattatcgaacctatt
gctgattcagatgagcgtgctgttgcgatatctgcacgcgagaattctgacatgatgcat
tctccagctcaggatgcagtgcttcgggtgcactctaggatctcagaggcatctgtggat
aaaagttcttctgcacctgcaaggcttcttgttccatcacagcatatcggttgcctacta
ggcaaaggtggatccattattgcagagatgagaaaagtaacaggtgctagcatccggatt
ttcgcaaatgaacagatcccaagatgtgcacaacgaaatgatgagatggttcaggatagt
gatagaattttttctgaatctttcagtggctgccgcatggaagaatttggtgctttcatc
accaaaagtaacccgtctgatagtacatcttttccgccaatactcatttttacagtcact
ggtagcttccaatccattcaagatgcattgattcatatcactggaaggattagggacatc
atcattcccaaaccacaccccagtggaggcatgcctccatatccacctgttggaaacatc
cctcttcaccaatcaagacaagaaccagctccgccacatcccagtggaggcatgcctcca
tatcctatgcattctttcagagctgatactcctatgggtccctttgatacaggtgatcat
cgacgacctcccccacattcaatggaacatatgggtgcagataggatgtcatactcgtat
ggttgtgagcaaggaggccctcagccatttctagagcaaccaccaccaagaacctgggct
cctgaggcaccaaagacaaacagtgaagcactaagaaacatgcctgatgctgtaccagcc
acagatttcagaaagggagcagtagcaagtgaaaaccaagtggccacaccaacaagtaca
actgaagttgttattccttgcaagtatgtaagttttgtttgtgggaccaatggcagtgat
cttgaagagataaaaaagatgtcaggtgcttcaattacagttcacgatccgaaacctggc
gatacaaactcaacaattgttatatgcggggatcctgaacaaactaagaaggcacagagc
ctgattcacgcgttcatattttgcggtctgtatcaaacctga
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