Phragmites australis (common reed): 133901612
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Entry
133901612 CDS
T10575
Name
(RefSeq) heat stress transcription factor B-2c-like isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133901612
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
133901612
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
133901612
NCBI-ProteinID:
XP_062199012
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Position
20:2277001..2280002
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AA seq
495 aa
AA seq
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MGRVFFSRAGLPLNYKKFLIRNRSFQKASSSVPSTQREAAFPHLETSVSPTQIRPGGGGQ
MAEQIGAAAAEAAASEPPAPAPVPAPAQRSLLTPFLTKTYQLVDDMAVDDVISWNDDGST
FVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDCFRRGEKRLLCD
IHRRKVAPAPAAPAQGLATAAAAAAASGVVTVAAAPIPMALPVTRPGSPALSSDEQVLSS
NSGSAEEHQLAPSGSGGSGSRSASGDMGEENERLRRENARLTRELGQMKKLCNNILLLMS
KYATSQQLDSSAALSSVVNCSGESSEAVPPLPPLPPAILELMPSCPALATAAAGLAADAG
PDAAARLFGISIGLKRSRDGDGEDSADHGAGAEVKPETSDPHSGSKEQSPDQHPWPIYRP
TPVYHSTRPCIGPDPGAGSDQDGSNSRLRIHQQIRAPLMYLCLWIVEMRSAFPGRCSISS
HPKLLIVGLGVFVIV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgggtttttttttctcgtgctggcctcccgttgaactataaaaaattcctaatc
cgcaatcgaagcttccagaaggcttcttcttccgtaccttccacccaacgcgaggcggct
ttcccgcatctggaaacttcggtttccccgactcagatccggccgggcggcggtggtcag
atggctgagcagatcggcgctgccgccgcggaggccgcggccagtgagccgcctgcgcct
gcgcctgtcccggcgccggcgcaaaggtcgctgctgacgccgttcctgacgaagacgtac
cagctggtggatgacatggcggtggacgacgtgatctcctggaacgacgacggctcgacg
ttcgtggtgtggcggccagcggagttcgcgcgcgaccttcttcccaagtacttcaagcac
aacaacttctccagcttcgtgcggcagctcaacacatacggatttaggaagatcgtgccg
gaccggtgggagttcgccaacgactgcttccgccgaggggagaagcgcctgctctgcgat
atacaccgccggaaggtggcgccggctccagccgcgcccgcgcagggcttggcgacggcc
gcagcggcggcagcggcgtccggggtggtaacggtggccgcagctccgattcccatggcg
ctgccggtgacgcggccgggctcaccggcgctctcctcggacgagcaggtcctgtcgtcc
aactccggctccgcggaggagcaccagctggcgccgtcaggctccggcgggagcggcagc
aggtccgcgtccggcgacatgggcgaggagaacgagcgtctccgccgcgagaacgcgcgg
ctgacccgcgagctcgggcagatgaagaagctctgcaataatatcctcctcctcatgtcc
aagtacgccacctcccagcagctcgactcctccgcggcgctgtcctccgtcgtcaactgt
tcgggggagtcatcggaggccgtgccccctcttccacccctccccccggcgatactcgag
ctgatgccctcgtgcccggccctggccactgctgccgccggcctcgcagccgacgcggga
cccgacgcggccgcgaggctgttcggcatatccatcgggctgaagcggtcgcgagacggc
gacggcgaggactcggcggaccacggcgccggcgcggaggtgaagccggagacgtcggat
ccgcattcaggcagcaaggagcagtcgccggaccagcacccctggcccatataccggccc
acgcccgtgtaccactcgacgcggccctgcatcggaccggacccaggggccgggtccgac
caagacggatccaactccagactcagaatccatcaacaaatcagggcgcccctgatgtat
ttatgcctgtggatcgtggaaatgagaagtgcatttccgggacgctgttcgatcagttct
catcccaagctgttgatcgtgggtttgggcgtgtttgtgattgtttga
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