Phragmites australis (common reed): 133901731
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Entry
133901731 CDS
T10575
Name
(RefSeq) light-mediated development protein DET1-like isoform X1
KO
K10571
de-etiolated-1
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133901731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133901731
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133901731
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GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
133901731
NCBI-ProteinID:
XP_062199177
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Position
2:complement(18417782..18425951)
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AA seq
512 aa
AA seq
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MVRFFRSGNLASRVFERQLLSPRPGATVNTVRQFYENLVPSHTIYDIDCPDYSFRKFTDD
GKYLVAFSRNHQDLIVYRPIWLTYSCNEECDSHDLPPKSKKFDSFFKQLYSIPLASSNEY
ICKDFFLYMECHQFGLFATSTAQSNDSNATEGAIHGVPSIEKIAFYLVRLEDGVILDEKA
FCNDFINLAHSIGAYLYEDLLCIVSLRYQTIHILQIRDSGNLVEVRRIGTFCREGDDLFL
HSHVQIGHGGSFLPGIKQRLLSYIFRKTWNEVLDQTSRVQHLKKKFYFHFQDYVDLIIWK
VQFLDRHHLFIKFGSVDGGVSRSTDQNLAFFAVYNMETTDIVSLYQNSSEELYSLFEHFY
DHFHANPQDSSHGKFISSHSNDVHALDQLRTIKNKASSSSQQFVKKMMASLPYTCQSQSP
SPYFDLSLFRYDEKLISAIDRHRHCTEHPIKFISVRQPNVVKFKIKPGSDSGTSDSRAKR
ISSFLFHPFFPLALSIQQTYMQPTVVNIHFRR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcttcttccgcagcggcaacctcgcctccagggtcttcgagcgccagctcctc
tccccgcgccccggcgcaaccgttaacactgttcgacagttctatgagaatttagtccca
agccacactatatatgacatagattgcccagattattcatttcgcaagttcactgacgat
ggaaaatatcttgtggcttttagtcgaaaccaccaagatttgattgtataccgtcccatc
tggttgacatattcatgcaacgaagaatgtgattctcatgatcttcccccaaaatcaaag
aagtttgacagcttttttaagcagctctactcaattccacttgcatccagcaatgaatat
atttgcaaggactttttcctgtacatggaatgccatcaatttggcttatttgcaacatca
actgcacaaagtaacgattcaaatgccactgagggtgcaatacatggggtgccatcaatt
gagaaaatagcattctatcttgtgaggctagaagatggtgtgatactggatgaaaaggct
ttctgcaatgattttatcaatctggctcatagtattggtgcttacttgtacgaggatctg
ctttgtattgtctctctgcgataccaaacaatacatatcctacagatccgagattcaggc
aaccttgtggaggtacgcagaattggcacgttctgccgggaaggtgacgatctatttctt
cattcacatgtccagattggtcatgggggttcttttcttcctggcatcaagcaacggttg
ctatcgtatatttttcgcaagacttggaatgaggttttggatcagacttcgagggtccag
catctgaagaagaagttctattttcacttccaagactatgttgatcttatcatatggaag
gtacagtttttggatcgccatcacctatttatcaagtttggtagtgtggatggaggggtt
tctcgaagcactgatcaaaatttagcattctttgctgtgtacaacatggagacgacagat
atagtttcactctaccagaattcatcggaggaactctattctttgtttgaacatttttat
gaccattttcatgcaaacccacaagattcatcgcatggaaaatttatctcgtcgcactcc
aatgatgttcatgctcttgatcaacttcgcaccattaaaaataaagcaagcagctcctca
cagcagtttgtgaaaaagatgatggcatcattaccttacacttgccaatcacagagtcct
tcaccatactttgacctatccctttttaggtatgatgagaagctgatttcagcaattgat
cgtcataggcattgcacagagcatccaataaaatttatatcagtgaggcaaccaaatgtt
gtcaaatttaagatcaaaccaggttcagattctggcacttctgacagcagagcgaaaaga
atttcttccttcttgttccacccatttttcccgcttgcactttcgattcagcagacttat
atgcagccaactgttgtcaatattcatttcaggagatag
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