Phragmites australis (common reed): 133901787
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Entry
133901787 CDS
T10575
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133901787
Transcription factors [BR:
paua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133901787
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
133901787
NCBI-ProteinID:
XP_062199265
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Position
20:782504..787007
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AA seq
507 aa
AA seq
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MAAASSVPFFGLGDTQMQPQGSSLQQNSAPTPAAAAAAPKKKRNQPSNPSPDAEVIALSP
RTLLATNRFVCEVCNKGFPREQNLQLHRRGHNLPWKLKQKNPKEARRRVYLCPEPTCVHH
DPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGTLF
SRRDSFITHRAFCDALARESAQMPPLGAGLYVGSCSMALGLSGAAPQMPAFADQAESSSA
AAAATAQFNHIMPSSSGSSMFRSQASASSSFFLGGSGAPSPAQNFSEDGDHSQGGQGSLL
HGKPAFHGLMQVQLPEQHQQPESNGNLLNLGFFSGNSSGAARGQDEHLVFLDQLNGSGGS
SNAGQGSVISSLGNHLSCSFPSLYNTSVSAGLPQNSATALLLKAAQMGSTSSSQNGPSVL
LRAAGFGAGGHQGDSRAAGERTAHETHFHDLIMNSLAGGGGGFSGAAGFGGVDDGKLSTR
DFLGVGRGSAMAPPGLHIGALDPAQMK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcctcatccgtgcccttctttgggctcggcgacacgcagatgcagccacaa
ggttcgtcgctgcagcaaaactccgcacccactcctgccgccgccgccgccgcgccgaag
aagaagaggaaccagccaagcaatccaagccccgatgcggaggtgatcgcgctgtccccg
cggacgctgctagcgacgaaccgcttcgtgtgcgaggtgtgcaacaaggggttcccgcgg
gagcagaacctgcagctgcaccggcgcgggcacaacctgccgtggaagctgaagcagaag
aatcccaaggaggcgcggcggcgggtgtacctgtgcccggagccgacgtgcgtgcaccac
gacccgtcccgggcgctgggcgacctcacggggatcaagaagcactacagccgcaagcac
ggcgagaagaagtggaagtgcgacaagtgcaacaaacgctacgccgtgcagtccgactgg
aaggcgcactccaagacctgcggcacccgcgagtaccgatgcgactgtggcacactcttc
tccaggagggacagcttcatcacccaccgcgctttctgcgacgcgctggctcgtgagagc
gcgcagatgccacccttgggcgccggcctctacgtcggctcctgcagcatggccctcggg
ctctccggcgcggccccgcagatgcctgcctttgcagaccaagcagagtcctcttcagca
gcagcagcagcaaccgcgcagttcaatcacatcatgccatcgtcctcgggctcctccatg
tttcgctctcaggcgtcggcctcctcgtcgttcttcctcggcggcagcggcgctccttct
cccgcccagaacttctccgaggacggtgaccactcccagggcggccagggctctctgctc
cacggcaagccggccttccacggcctgatgcaagtgcaactccccgagcagcaccagcaa
ccggaaagcaacggtaacctcctgaaccttgggttcttctctggcaacagcagcggcgcg
gcccgcggccaggacgagcaccttgtcttcctagaccagctcaacggcagcggcggcagc
agcaacgctgggcagggtagcgtgatctcgtccctggggaaccacctcagctgcagcttc
ccttccctgtacaacacatctgtgtcggccggcctgccgcagaactcagcgacggcgctc
ctactcaaggcggctcagatgggctcgacatcgagcagccaaaacggtccgagcgtgctg
ctccgtgccgccggcttcggtgccggtggtcatcagggggatagcagggctgcaggagaa
aggacggcgcacgaaacgcacttccatgacctcatcatgaattctctggcgggcggcggc
ggcggcttctccggtgccgcaggtttcgggggcgtggacgacggcaagctgagcacaagg
gacttcctcggcgtcggcaggggctcggctatggctccgcccgggctccacatcggtgca
ctggacccggcccagatgaagtga
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