Phragmites australis (common reed): 133901815
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Entry
133901815 CDS
T10575
Name
(RefSeq) tRNase Z TRZ2, chloroplastic-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paua03016
]
133901815
Enzymes [BR:
paua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
133901815
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
133901815
Prokaryotic type
133901815
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Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
133901815
NCBI-ProteinID:
XP_062199306
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Position
20:4577713..4581256
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AA seq
359 aa
AA seq
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MATTSLFSLPSLRLISRASASASASRFQTLAARKPAASTVSGDGGGGRGGGGGGLLSVLD
RALADEEEYRRARAQVQRKGVEVEGYAIEGVSVGGHETCVTVPSLNVAFDIGRGPHFAVS
QDYLFITHAHLDHIGGLPMYIATRGLYNLKPPTVFVPPCIRDDVEELLQVHRRMSQIELK
VELVALDLGETYEIRNDLVARPFQTYHAIPSQGYVIYSIRRKLKKQYAHLKGSQIMKLKQ
SGTEITDTILYPEVAFTGDTKSDFILDPRNADALRAKVLITEATFLDDHIDVEHAREHGH
MHLSEIMEHSQWFRNEVIVLTHFSNRYSLEDIRQAVSRLQPKLHSKVVALTEGFKSEYR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacctccctcttctccctgccctcgctccgcctcatctcccgcgcctccgcc
tccgcctccgcctcccgcttccagacgctcgccgcgagaaagccggcagcctccaccgtc
agcggcgacggcggcggcggcagaggaggcggcgggggcgggctgctgtcggtgctggac
cgggcgctggcggacgaggaggagtaccggcgcgcgcgcgcccaggtgcagcgcaagggc
gtggaggtggaagggtacgccatcgagggcgtctcggtgggcgggcacgagacctgcgtc
accgtgccgtcactgaacgtcgcgttcgacatcggccgcggaccgcacttcgccgtgagc
caggactacctcttcatcacccacgcccacctcgaccacattggtggtcttccaatgtac
atagcaactcgtggcctctacaacttgaagcctccaactgtatttgtaccgccctgcatc
agggatgatgttgaggagctgcttcaggtccatcgtagaatgagtcaaattgagctgaaa
gttgaattagttgcactagatttgggagagacatatgaaatacgtaatgaccttgttgcc
agaccatttcaaacttaccatgctatacccagccagggttatgtcatctactccattcga
agaaagttgaaaaaacagtatgctcacttgaagggtagtcaaataatgaaattgaagcaa
tcaggcactgagattacagatactatactgtacccagaagttgccttcactggagataca
aagtctgattttattcttgacccacgaaatgcagatgccctgagagcaaaagttctcata
actgaggcgaccttcctagatgatcacattgatgttgagcatgctagggagcatggccac
atgcatctgtctgagataatggagcattcccagtggtttagaaacgaagtgatcgtactc
actcatttctcaaatcggtatagccttgaggatattcgacaggctgtttccaggctacaa
cctaagttacattcaaaagttgttgctctgacagaaggcttcaaatctgaatatagataa
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