Phragmites australis (common reed): 133902035
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Entry
133902035 CDS
T10575
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paua03400
]
133902035
Enzymes [BR:
paua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
133902035
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
133902035
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
133902035
NCBI-ProteinID:
XP_062199591
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Position
20:1734160..1740789
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AA seq
616 aa
AA seq
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MVKIVTYNVNGLRPRVAQHGSLRRLLDALDADIICFQETKLSRQDLSADVIMAEGYEAFV
SCNRSSKGRGSYSGVATFCRVTSAFSSQEVALPLAAEEGFTRLQDYVKNSEIAGDFVLEM
PVEEEGLGEVTREDLLRVDNEGRCIITDHGHFVLFNIYGPAVEEDDKERVCFKLLFYKIL
QKRWEHLLALGKRVFVVGDLNIAPASIDRCDAPPGFEKQMFREWLRSMLREHGGPFFDAF
RSKHPERTGAYTCFNQKVGAEEYNYGSRIDHILISGACLHHYDSVENHSIFYCHVEECEI
TNNFKRGNSENLSKWKGGRSNKLEGSDHIPVYILLKEIPELPAHNIPPSAARYLPEVRGR
QQSIVSFLKKGKTNELQDAANLNLSEDRVDSCCSDGLENKIIAKEELAAGITEFPRGGNL
PNLMFKGTNLDQWINEGSSGISQNSKKAPFASTKSVPNKKIKHDLSSQPTIKSFFQQPGS
KTGNSNTSTLVTPAETVHYANETCLPNDDSLPENMQCATSAAKDQDNSNTSRSLSTDKCD
TIAATLEWQRIQKKMKMTLPRCKGHREPCIPRSVKKGSNIGRLFYVCARAQGPASNPEAN
CGHFQWAPVKSKEKHP
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatagtgacgtacaacgtgaacgggctgcggccgcgggtggcgcagcacggc
tcgctccgccgcctcctcgacgccctcgacgccgacatcatctgcttccaggagaccaaa
ttgtcaaggcaggacctctctgcagatgtcataatggctgagggatacgaggcttttgtt
tcatgcaatcgttcttcgaaagggcgtggatcatactctggtgttgctacattttgccga
gtaacatcagcattttccagccaggaggttgctttgccattagcagccgaagaaggcttt
actagactacaggactacgtgaaaaacagtgaaattgctggggatttcgttcttgaaatg
cctgtagaagaggagggtcttggtgaagtcacaagagaggacctgctaagggtggacaat
gaggggcggtgtatcatcactgatcacggacattttgttcttttcaacatatatggccca
gctgttgaagaagatgataaagagcgtgtttgttttaagctactgttttataagatattg
cagaaacgatgggaacatctattggctcttggaaagagagttttcgttgttggtgatttg
aatattgctcctgcttctatagataggtgtgatgcgccacctggttttgagaagcaaatg
ttccgagaatggctgagatccatgctgagagaacatggaggtcccttttttgatgctttt
agatcaaaacatcctgaaaggacaggcgcatatacttgctttaatcagaaagttggcgca
gaagaatacaattatggctctagaatagaccacattctcatttctggtgcctgtctccat
cactacgattctgtggaaaaccatagcattttttattgccatgtagaagaatgtgagata
acaaataatttcaaaagagggaattctgaaaatctgtcaaagtggaaaggaggaagaagt
aataagctagaaggatctgatcatattccagtttatattttactgaaagaaatacctgaa
cttccagctcataatatcccaccatcagctgcaagatatcttcccgaggtccgtggtcgg
caacagagtattgtatcattcctcaagaaagggaaaactaatgaactgcaagatgccgca
aatttaaatttgtctgaggatagagttgatagctgttgtagtgatggcttggaaaataaa
attatagctaaggaagaactggcagctggtataactgagtttccaagaggtggtaacctt
cctaatttgatgtttaaggggacaaatcttgatcaatggataaatgaaggttcaagtggc
atctcccaaaatagcaagaaagctccatttgctagcaccaagtctgtgccaaacaagaag
attaaacacgacttgtcctctcaaccaactatcaagtcatttttccaacaaccagggtca
aagacaggaaattccaataccagtaccttagttacaccagcggaaacagtacattacgct
aatgaaacatgtcttccaaatgatgatagcctgccagaaaacatgcagtgcgcaacttca
gctgccaaagatcaggataactcaaatacatcacgttcactttcaacagacaagtgtgac
actattgctgcaacattagagtggcaaagaatacagaaaaaaatgaagatgaccctacca
cgttgcaaaggacatcgtgaaccatgcattccaaggtctgtgaagaagggctctaatata
ggccgtttattctatgtctgtgctcgtgctcagggacctgcatcaaatccagaagcgaat
tgtggtcactttcagtgggcacctgtaaaatctaaagagaaacacccgtga
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