Phragmites australis (common reed): 133902061
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Entry
133902061 CDS
T10575
Name
(RefSeq) ornithine decarboxylase 1B, chloroplastic-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00330
Arginine and proline metabolism
paua00480
Glutathione metabolism
paua01100
Metabolic pathways
paua01110
Biosynthesis of secondary metabolites
paua04148
Efferocytosis
Module
paua_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
133902061
09106 Metabolism of other amino acids
00480 Glutathione metabolism
133902061
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133902061
Enzymes [BR:
paua01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
133902061
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
133902061
NCBI-ProteinID:
XP_062199622
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Position
20:1382907..1384789
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AA seq
410 aa
AA seq
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MVGGSPMQAVLMAPGVKDRKVLAFKRDALKEKDAVTSLIRSIVTSSPDQRSAFYVFDLAK
VVDLFRTWRRALPDVRPCYAVKCNPDPALLGALVALGAGFDCASRAEIEAVLALGVQPRD
IVYANPCKAEAHIEYASEVGVNLTTYDSEEEVAKVKRCHPKCELLLRLKGPEGGEVRVDL
GTKYGALPEEVAPLLRAAQREGINVAGVSFHVGSGACRLDVYREAIEAARAAFDAAAALG
MPPMRVLDIGGGFVAGATFDEAATVINGALAEHFGDLPCVEVIGEPGRYFAESAFTLAAR
VIGKRTRGEVREYWIDDGLYGSLNCIMMDHYVPHPRPLASPRPGEKTYTSTVFGPTCDSL
DVVVTGYHLPEMSVGDWLVFDDMGAYTTGAGSNFNGFATSDIKIYVAYSS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggttggaggcagccccatgcaggccgtgctgatggcccccggcgtgaaggacaggaag
gtgctcgcgttcaagcgcgacgcgctcaaggagaaggacgccgtcaccagcctcatccgc
tccatcgtcacgtccagccccgaccagcggagcgccttctacgtcttcgacctagccaag
gtcgtcgacctcttcaggacgtggcgccgcgcgctccccgacgttcgcccctgctacgcc
gtcaagtgcaaccccgacccggcgctcctcggcgcgctggtcgcgctcggcgcgggcttc
gactgcgccagccgcgccgagattgaggccgtgctcgcgctcggcgtccagccccgcgac
attgtatacgccaacccatgcaaggccgaggcgcacatcgagtacgcctcggaggtcggc
gtcaatctcaccacctacgactccgaggaggaggtcgccaaggtcaagcgctgccacccc
aagtgcgagctcctgctccgtctcaagggccccgagggcggcgaggtcagggtcgacctg
gggaccaagtacggcgcgctccccgaggaagtggcgccgctccttcgcgctgcccagcgc
gaggggatcaacgtggccggcgtctccttccacgtcgggagcggcgcgtgccgcttggac
gtgtaccgcgaggccatcgaagccgcgcgcgcggcgttcgatgcagccgccgccctcggc
atgccgcccatgcgcgtcctcgacatcggcggcggcttcgtggccggcgccacgttcgac
gaggcggcgacggtgatcaacggcgcgctcgctgagcacttcggcgacctgccgtgcgtg
gaggtgatcggcgagccggggcggtacttcgccgagtcggcgttcacgctcgccgcgcgc
gtcatcggaaagcgcacgcgcggcgaggtgcgcgagtactggatcgacgacggcctctac
ggctcactcaactgcatcatgatggaccactacgtgccgcacccgaggccgctggccagc
ccgcgcccaggcgagaagacgtacacgtccacggtgttcgggccgacgtgcgactcgctc
gacgtggtggtgactgggtaccatctgccggagatgagcgtgggggactggctcgtcttc
gacgacatgggcgcctacaccaccggggccggctccaacttcaacggcttcgccacgtcg
gacataaagatctacgtggcatactccagctga
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