Phragmites australis (common reed): 133902087
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Entry
133902087 CDS
T10575
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133902087
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133902087
Enzymes [BR:
paua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133902087
Peptidases and inhibitors [BR:
paua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133902087
Ubiquitin system [BR:
paua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133902087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Peptidase_C12
Motif
Other DBs
NCBI-GeneID:
133902087
NCBI-ProteinID:
XP_062199646
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All DBs
Position
20:5529642..5540721
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AA seq
917 aa
AA seq
DB search
MAVADVSSVLAAAVAAVLVVLAVVAHGWLRRAEARREEVQRLAWHAAEEVEVAEREEAYY
YGQYGGFVMASDLAEAPPLWTALEVAPAREEVEAAREEVEAARASPPVAAAMGKGACAVC
GRPTTFRCKRCKAVKYCTFKCQIAHWREGHKDECHPPGVGAKQYDTIESVMAGVEPAVKG
MPSDKTSYTAEASADGHGNDDRFIRFSQFTGQAESVDCSRLSTSSKACKVHDAAVREKFC
HTAPDQPAGLESGLEQSNKQALGTDNLGSSRHLPCVPAVDKVPFTHSGAYCLARNPSKRA
DNLPRPSVRSESAGVMPNNPSMEKKNARQQTAPKVVRHYPAELTLFPYKHFVDLYNFQKV
ELHPFGLYNLGNSCYANAVLQCLAFTRPLTAYLLGGHHSRNCSIKEWCFMCELEKLIVEG
KRGKSPISPTGILSHLHEIGSSFGPGREEDAHEFLRYAIDTMQSTSMKEAQKNGVHRLAE
ETTLMQLIFGGYLLSKIKCTKCEASSEQCERILDLTVEIDGDVRTLDDALRRFTSTEVLD
GDNRYHCSRCKSYERARKKLRISEAPNILTIALKRYQSGKFGKINKVVRFKEHLNLSDYM
SATDDYTPVYKLYAVVVHRDDMNAAVSGHYVCYVKDPQGRWHEMDDSKVKPVSLEKVLST
CAYMLLYARCSPRAPGFVRKAMLTQGPSRAKKPKQMADSGSAPLGGGSNLNRHQGGQLCK
GRVAHDLTYRLDTSDDSSFRVPGFSRSDSSSLFSNSDAGSTSTFSSDSTDSTRSSTSMEE
CGYLFRSFDQMCPVSIPEEDELSYSRQRSSLNPSSSSGQDMDQAGEFARQYQHKHQAGRG
VWEGGENPSVSYTDQGKHQGSSSRSRSCSRSCKLTEQRRVTGEIGHGPIEGGAAFYIDGQ
VGRGRPRYFIDTGGSGL
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggcggatgtgtcgtcggtgctggccgcggcggtggccgctgtgctagtggtg
ctggcggtggtggcgcacgggtggctgcggcgcgcggaggcgcggagggaggaggtgcag
cgcctcgcgtggcacgccgcggaggaggtggaggtcgctgagagggaggaggcctactac
tacggccagtacggcgggttcgtgatggcgtccgacctggcggaggcgcccccgctctgg
acggcgctggaggtcgctccggcgcgggaggaggtagaggcggcgcgggaggaggtagag
gcggcgcgggcgtcccctcccgtagcggcggcgatggggaagggggcctgtgcggtgtgc
ggcagaccaacgacgttccgctgcaagagatgcaaggccgtcaagtactgcaccttcaaa
tgccagatagctcattggagagaaggtcacaaagatgaatgccatccaccaggtgttggt
gccaagcaatatgatacaattgaaagtgtgatggctggagtagagccagcggttaagggt
atgccatctgataagacatcctatactgcagaggcttctgcagatggccatggcaacgac
gataggtttattagattctctcagtttactgggcaggcagagtctgttgattgttcaaga
ctttcaacttctagtaaagcttgcaaagttcatgatgctgctgttcgtgaaaaattctgt
catactgctcctgaccagcctgctgggttggaatctggattggagcaatctaacaaacaa
gctcttggcacagacaaccttggaagctctagacatttgccatgcgtgccagctgttgac
aaagttcctttcactcacagtggtgcatattgtttagcacgtaacccatctaaaagggca
gataatcttccacgtccgtcagttagatcagagagtgcaggtgtgatgccaaataatccg
tcaatggagaagaaaaatgctaggcaacaaacagctccgaaagttgtgaggcattatccg
gcggaattgacactttttccatacaaacattttgtcgacctctacaacttccagaaggtg
gaattgcatccttttggtctttataaccttggcaatagctgctacgcaaatgctgttctt
cagtgcttggcatttacccgaccacttacagcgtaccttttgggaggacatcattcacga
aattgttctataaaggaatggtgcttcatgtgtgagttggaaaaactcattgtagagggt
aagcgtggaaaatctcccatatcacctactgggatactatctcatttgcatgagattggg
agtagctttggcccgggcagggaagaagatgctcatgaatttctcaggtatgcgattgat
actatgcaatccactagcatgaaggaagcccagaaaaatggtgtccatcggctagccgaa
gaaacaacgctgatgcaattaatattcgggggctatctactatctaagataaaatgcacc
aagtgtgaggccagttcagaacaatgtgaacgtattttggatctaactgttgaaatagat
ggggatgtccgcaccctcgatgatgcacttcgtcggtttacatctacagaagttttagat
ggtgataacagataccattgtagcagatgcaagtcatatgagcgtgccagaaagaagttg
agaatatcagaagcgccaaatattcttaccattgcattgaaaagatatcagtctggtaag
tttggcaagatcaataaggtcgtcaggttcaaggagcacttgaatttgtctgactacatg
agtgcaacagatgattatacccctgtgtacaagctgtatgcggtggttgtccatcgtgat
gatatgaatgcagccgtttcaggccattatgtatgttatgtcaaggatccccaggggagg
tggcacgagatggatgatagcaaggtgaaacctgtttctttggaaaaagtcctgtcaaca
tgtgcgtacatgcttctttatgcaaggtgctcaccacgtgccccaggctttgtaaggaaa
gcaatgcttactcaaggtccatcgcgtgctaagaaacccaagcagatggcagattcagga
tcagcgcctttgggaggaggcagtaacttgaacaggcaccaaggtgggcagttgtgcaag
ggtcgtgtagcgcatgacctcacatacagattggatacatccgatgattcgtcgtttcgg
gtaccgggctttagtcgaagcgacagctcctcgctgttcagcaactctgatgctgggtca
accagcactttcagcagtgatagcactgacagcacaaggagctctaccagcatggaggag
tgtggttacttatttagaagctttgatcaaatgtgcccagtaagcatacccgaggaagat
gagcttagctactcgcgacagaggtctagcttgaaccctagctcatcttcaggccaagac
atggatcaagcaggtgaatttgcccggcagtaccagcacaagcatcaggctggcagaggg
gtttgggagggtggggagaatccatccgtctcctatactgaccaaggtaaacaccagggt
agtagcagtcgtagtcgtagttgtagtcgtagttgtaagttaacagaacagcgtagggtg
acaggggagattggccatggccctatagagggcggggcggcgttttacatagacggccaa
gtagggagaggacggcccaggtattttattgatacaggcggctcggggttgtag
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