Phragmites australis (common reed): 133902929
Help
Entry
133902929 CDS
T10575
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133902929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133902929
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133902929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
133902929
NCBI-ProteinID:
XP_062200238
LinkDB
All DBs
Position
21:complement(7274835..7282177)
Genome browser
AA seq
450 aa
AA seq
DB search
MESDQGKLFIGGISWETTEDKLSEHFSAYGEVTQAAVMRDKLTGRPRGFGFVVFADPAVV
DRALQDPHTLDGRTVDVKRALSREEQQASKAANPSVGRNSGGGGGGGGGGDAGGVRTKKI
FVGGLPSTLTEDGFRQYFETFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDRVLHKTF
HDLGGKMVEVKRALPREANPGTGGGRSMGGGGYQSNNGSNSNTGSYDSRADASRYGQVQQ
GSGGYPSYGTVGYGAGATGYGYGANPGGGYGNYGAGGYGGVPAGYGGPYGNPSAAGSGYQ
GGPPGSNRGPWSSQAPSAYGAGSYGGNTGYGAWNSSSGGGNAPTSQAPGAAVGYGSQGYG
YGGYGGDGSYASHGGYGAYGARNDGAGNPATGGASGYGAGYGSGTGNSGYPNAWSDPSQG
GGFGGSVNGGSEGQSNYGSGYGSVQPRVAQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggaccaggggaagctcttcatcggcggcatctcgtgggagacgactgaggac
aagctgagcgagcacttctccgcctacggcgaggtcacccaggccgccgtcatgcgcgac
aagctcaccggccgcccccgcggcttcggctttgtcgtattcgccgaccccgccgtcgtc
gaccgcgcgctgcaggacccccacaccctcgacggccgcacggtcgatgtaaagcgggcg
ctctcgcgggaggagcagcaggcctccaaggccgcgaaccctagcgtcgggaggaactca
ggtggtggcggaggcggcggcggcggtggcgacgcggggggtgttcggacgaagaagatc
tttgtgggcgggttgccctccactctgacggaggacgggttccggcagtacttcgagacc
ttcgggattgtaaccgatgtcgtcgtgatgtacgaccagaacacacagcgcccacggggg
tttgggttcattacctttgactcagaggacgctgttgaccgcgtgctgcacaagaccttc
cacgatctgggtgggaagatggtggaggtgaagcgtgcgctgccccgggaggcaaaccct
ggcaccggtggcgggcgttccatgggaggtgggggttatcagagcaacaatggatctaac
tccaacactggcagctatgacagtagagctgatgctagcagatatgggcaggtgcagcag
gggagcggtggctatccaagctatggcacggtaggttatggtgctggtgcgactgggtat
ggatatggtgctaaccctggaggtggatatggaaattatggagctggaggatatggaggt
gttcctgctgggtatggtggaccttatggaaatccaagtgcagctggttctggttaccaa
ggtggtcctccaggctcaaatagaggaccctggagcagtcaagctccatctgcttatggc
gctggaagttatggtggcaatacaggctatggtgcttggaacagctcttctggtggtggc
aatgcgcccactagtcaggcccctggtgcagctgtgggctatgggagccagggctacggg
tatggtggatatggaggggatgggtcatatgctagtcatggaggatatggagcttatgga
gcgcgtaatgatggtgctggcaatcctgctactggtggagcatctggatatggtgcaggg
tatggcagtgggactggcaactctggttatccaaatgcttggagtgatccgtcacaaggt
ggtgggtttggcggttcagtcaacggaggttccgaaggacaatcaaattatggcagcggc
tatggcagtgtgcaacctagggttgctcagtaa
DBGET
integrated database retrieval system
