Phragmites australis (common reed): 133902933
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Entry
133902933 CDS
T10575
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133902933
03012 Translation factors [BR:
paua03012
]
133902933
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133902933
Translation factors [BR:
paua03012
]
Eukaryotic type
Initiation factors
eIF-3
133902933
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Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
RRM_1
ANAPC4_WD40
Beta-prop_ELP1_1st
Es2
DUF2004
Motif
Other DBs
NCBI-GeneID:
133902933
NCBI-ProteinID:
XP_062200243
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Position
21:815769..820394
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AA seq
720 aa
AA seq
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MALAISMEGIEARARELGVDLSSVDLDSITLPAGEDFGILSDDEEVLQNEEPPELEMGLS
NIFVVDNLPVVPPEKFEKLENVIRKIYSQIGLIKENGLWMPVNLETKKTYGYCFIEYNTP
QEAELAREKTNGYKLDKSHIFAVNMFDDFEKYMKVPDTWTPAEIKPYTPGENLLKWLTDE
KARDQFVIRAGTFTEVYWNDARKLAPELVFQKQYWTDSFVQWSPLGTYLATVHRQGSQVW
GGENGFERLMRFAHSQVKLIDFSPGERYLITYSSHEPSNPRDTHRVVLNIFDVRTGKVMR
DFKGSADEFTTGGNTGVSGVSWPVFRWGGGKDDKYFARLGKNVISVYETDTFSLLDKKSL
KIENVVDFSWSPTDPIISLFVPEMGGGNQPARVSLVQIPGKEELRQKNLFSVSDCTMYWQ
NNGEYLAVQVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRF
AVIHGDGPRPDVSFYTMGTANSTSRVSKLTTLKSKQANALFWSPAGRFIVLAGLKGFNGQ
LEFYNVDELETMATGEHFMATDIMWDPTGRYLATAVTSVHEMENGFQIWSFNGKHLYKVS
KDHFYQFIWRPRPPSLLTPEKEEEISKNLKKYSKKYEQEDQDAFNQLSEQERRRRTELQE
EWDAWVAKWKQMHEEERAYRMELRDGEASDEEEEYEAKEVEVEEVVDVNEEVLAFDLDQE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgcaatctccatggaaggcatcgaggcgcgggcgcgggagctcggggtggac
ctctcctccgtcgatctggactccatcaccctccccgccggcgaggacttcggtatactc
agtgatgacgaggaggtacttcagaatgaggaacctccagaacttgaaatgggtttatcc
aacatttttgttgtggacaatctgccagttgttcctcctgaaaaatttgagaagcttgag
aatgtcatacgcaagatctacagccaaattggtttgatcaaagaaaatggtctttggatg
cctgtaaacctagagacaaagaagacctatggctactgcttcattgaatataatacacct
caggaagctgaacttgctagggagaaaaccaatgggtacaaactcgacaagtctcacatc
tttgcagttaatatgtttgatgactttgagaagtacatgaaagttcctgatacatggacg
cccgctgaaattaagccatacactcccggagaaaatcttctgaaatggctaactgatgag
aaggcacgagatcaatttgtcatccgtgctggtacattcacagaagtttactggaatgat
gcaaggaagttggcgcctgagcttgtgtttcaaaagcagtactggacagatagttttgtt
caatggtcccctcttggaacatacttggcaacagttcataggcagggatcgcaggtgtgg
ggcggtgaaaatggcttcgagcgcttaatgcgttttgctcattcacaggtgaaactgatt
gacttctctcctggtgagagatatttgatcacatacagtagccatgagcccagcaaccct
agagacacacatagggttgtcctaaatatctttgatgtaaggactgggaaagtgatgcga
gactttaagggaagtgctgatgaatttactactggcgggaatactggcgtttctggtgtt
tcatggcctgtcttcaggtggggcggtggaaaggatgataaatattttgcgaggcttggg
aagaatgttatatctgtttatgaaactgatacgttctcccttcttgataagaagtccttg
aagattgaaaatgtagtggacttcagctggtctcccactgatcctattatatccctgttt
gttcctgaaatgggtggtggaaatcagcctgcgagggtgagtcttgtgcaaattcctggc
aaagaggagctgcggcagaaaaaccttttcagtgtcagtgattgcacgatgtactggcag
aacaatggagaatatcttgctgttcaagttgatagatacacaaaaacaaagaagagcaca
tacactggttttgagctatttagaataaaggaaagggacattccaattgaggtccttgaa
ctcgagaataagaatgacaagatcattgcatttgcctgggagcctaaaggtcatcgcttt
gctgtcattcatggcgatggccctaggcctgatgttagcttctacaccatgggaacagca
aacagcactagccgtgtgtccaagctcacaactctcaagtccaagcaagctaatgcattg
ttctggtctcctgctgggcgcttcattgtccttgctgggttgaagggtttcaatggacag
ctggagttctacaatgttgatgagcttgagaccatggcaacaggagagcattttatggca
actgatatcatgtgggatcctactgggagatatctcgcaactgcagttacctcagtccat
gaaatggagaatggttttcaaatatggtccttcaatggcaagcacctttacaaggtgtcg
aaggatcatttctatcagttcatatggcgcccaagaccaccttcgctactgactcctgag
aaggaagaggagatttcgaagaacctgaagaaatacagcaagaaatatgaacaagaggac
caggacgcattcaaccaactgagcgagcaggaacgcaggaggcgaacagagctccaggaa
gaatgggatgcatgggtcgccaagtggaagcagatgcatgaggaggagcgagcatacagg
atggagctgagggacggggaggccagcgatgaggaggaagagtatgaggccaaggaggtt
gaggtggaggaggtggtggatgtcaatgaagaagttcttgcattcgacctagatcaggag
tga
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