Phragmites australis (common reed): 133902949 Help Entry 133902949         CDS       T10575                                  Name (RefSeq) protein OPAQUE1-like isoform X1   KO K10357   myosin V Organism paua  Phragmites australis (common reed) Pathway paua04814   Motor proteins Brite Messenger RNA biogenesis [BR:paua03019]  Eukaryotic type   mRNA surveillance and transport factors    Factors involved in mRNA localization     Cargo complex      133902949    mRNA cycle factors     P-body specific factors      133902949 Membrane trafficking [BR:paua04131]  Others   Actin-binding proteins    Myosins     133902949 Mitochondrial biogenesis [BR:paua03029]  Mitochondrial quality control factors   Mitochondrial dynamics    Retention of mitochondria     133902949 Cytoskeleton proteins [BR:paua04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Myosins      133902949 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Other DBs NCBI-GeneID:  133902949 NCBI-ProteinID:  XP_062200260 LinkDB All DBs Position 21:12231390..12267270 Genome browser AA seq 1511 aa AA seqDB search MILRPGTAVWVEHPDLAWAEAEVVSSASTPSSPSTVTVVLSSGVKAVVDGRKVLPRDTEA DLCGVDDMTKLVYLHEPGVLCNLARRYALNEIYTYTGRILIAVNPFAKLPHIYDMHMMEQ YRGVQFGELSPHVFAIADASYRAMVGENCSQSILVSGESGAGKTETTKLIMQYLTFVGGR ATGDIRSVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDKSGRISGAAVRTYLL ERSRVVQISESERNYHCFYQLCASRQDADKYKLAHRRNFNYLNQSHTYELEGVSDAEQYL KTRRAMDIVGICFADQEAIFRTVAAILHLGNIDFSPGKEFDSSAIKDEKCQFHLQMVADL LMVDANLLLSTLCYRTIKTPEANIIKAVDSSSAVIGRDALAKTVYARLFDWLVDNINKSI GQDMESRAQIGVLDIYGFECFKYNSFEQLCINFANEKLQQHFNKHVFKMEQEEYETEEIN WSYIEFVDNQDILDLIEKKPIGIVSLLDEACMLGKSTHETFAMKLFQNLRAHPRLEKPKL SKTDFALSHFAGKVTYQTDLFLEKNRDYIIAEHQNLLSSSKCSFVSGIFASQQDDPSKPS YKFSSVASRFKQQLQALMETLSSTEPHYIRCIKPNSLNYPQKFENGSVLQQLRSGGVLEA IRISLAGYPTRRTYSEFVNRFGLLVPEHMDERFDERSLTEIILKQLNLKNFQLGRSKVFL RAGQIAVLDSRRAEILDSAARIIQGHFQTFIARKRFLSTRKASICLQMYCRGCLARNILE ARRQIAAAVSVEKYARRWLCRCSYMHLRSAALVIQSGIRYILAVQRLLHLKNAKASTVIQ AWWRMRKLHNVHQQYRWATVLVQCCWRQKLAKRALWNLKHAAYETGALREAKGKLERSLE DLTLRFTLERRQRLSAEESKTLEISKLLKILESVKSELEASNEENKNNCKKIASLQHQLE LWTKDQEALRNSLSQIEEVKRENISLKAKNTEMEQELLKAQQCSHDNIDKLHDVEKNYLH LRDNLQNLEDKISNLEDENHLLRQKALNLSPRHSRTGSHPLVASPCSPRSSFESSPVKLA PLPQNLTELRRSRMNSDRHEDYHEVLQRCIKDDMGFKKGKPVAACIIYKCLLHWGVFEAE RTTIFDFIIHTINTILKTENENSILPYWLANASALLCMLQRNLRSKGFITAPSRSSSDTH LSEKANETFRSPLKAFGQRISMSHIDARYPAMLFKQQLTASLEKIFGLIRDTLKKEISPL LSLCIQAPKLAQGGTGRRSRSPDVTLQQPISTHWDRIIKFLDTLMDRLHKNFVPSFFIRK LVTQVFSFINVQLFNSMLLRRECCTFSNGEYVKSGLCVLEKWIVDTKEEHAGAAWEELKY IRQAVDFLIIPQKSKKTLEQITKSICPALSVRQIYRLCTMYWDDKYGTHSVSSEVVAQMR DMVSNDAQNPVSNSFLLDDDLSIPFTTEEIAAEVPAVDMSNIEMPSSLRHVHSAQFLMQH LQSSYSSRRTA NT seq 4536 nt NT seq  +upstreamnt  +downstreamnt atgatcctccgccccggcaccgccgtgtgggtggagcacccggacctcgcctgggctgag gccgaggtcgtctcctccgcctccaccccctcctcaccatccaccgtcacggtcgtcctc tccagcggcgtcaaggctgtggtggacgggaggaaggtcctgccgagggacacggaggca gacctttgcggcgtcgatgacatgaccaagctcgtctacctccatgagcccggggtgctc tgcaacctcgcgcggcgctacgcgctcaatgagatctacacatacacagggcgcatcttg attgcagtaaacccttttgcaaagttgcctcatatctatgatatgcatatgatggagcag tacagaggcgtgcagttcggggaattgagcccgcatgtttttgccattgctgatgcatca tacagagctatggttggcgagaactgtagccagtccatattagtcagtggagagagcggt gctggaaaaacggagactaccaagctcatcatgcaatatcttacttttgttgggggtcgt gcaactggtgatatccgctccgtggagcaacaagttctagagtcaaacccactgttggag gcttttggtaatgcacggacagtgagaaatgataactccagtcgattcggaaaatttgtt gagattcagtttgacaaatcaggtagaatttctggcgctgcagttcgaacttatctcctg gaaaggtctcgtgttgtgcaaatatctgaatctgaaaggaattaccactgtttttaccaa ctttgtgcatctaggcaggatgcggataaatacaaacttgctcaccgtaggaactttaac tacctgaatcaaagccatacatacgagttagaaggggtcagtgatgcggagcagtatttg aaaacacggagagcaatggacattgtcggcatatgttttgccgatcaggaagccatattc cgtactgtggctgctatccttcatctaggaaatattgatttttctcctggaaaagagttc gattcgtctgctatcaaagatgaaaagtgccaattccatctccagatggttgctgatttg cttatggttgatgcaaaccttttgctttcaacactgtgctatcgcacaattaaaactcct gaagcaaacataatcaaggcagttgacagttcttctgctgtaatcggccgtgatgctctt gcaaagactgtttatgctcgattatttgattggcttgttgacaacattaataagtccatt gggcaggacatggagtcgagggcacagattggggtcttggacatctatggttttgagtgt tttaaatataacagctttgagcagttgtgcatcaactttgctaatgaaaagcttcaacag cattttaataagcatgttttcaagatggagcaggaggaatacgaaacagaagaaattaat tggagctacattgaatttgttgataaccaagatatattggatcttattgaaaagaaacca attggcatagtttcacttttggatgaagcatgcatgcttggaaaatcaacacatgagact tttgcaatgaagttatttcagaatttgagagcacacccaagactagaaaaaccaaagctc tcaaagacagattttgccctatctcatttcgctggaaaggtgacctaccaaactgattta tttttggagaagaaccgagattatataattgcagagcaccagaatcttttgtcttcttca aaatgctcatttgtttctggcatctttgcttcgcaacaagatgatccatcaaaaccatct tataagttttcttcagtagcttcacgatttaagcaacaactccaagcgctaatggagaca cttagctcaactgaacctcattacatccgctgcataaaaccaaattctctgaactatcct cagaaatttgaaaatggcagtgtactacagcaactgcgtagcgggggtgtactagaggct attaggataagtctggctggttatcccacaaggaggacatactctgaattcgttaatcgc tttggacttcttgtgccagaacacatggatgaaaggtttgatgagagatcattgacagag ataatcctaaagcaactaaacctcaagaacttccaacttggcagatcaaaagtttttctc cgggctggccagattgctgttttggactccagacgtgctgagattctagatagtgctgct aggatcattcagggtcactttcaaacctttattgctcgaaagagatttctttctactagg aaagcttctatttgtctccaaatgtattgccgagggtgtttagcacgaaatattcttgaa gctaggagacagattgcagcagctgtttcagttgaaaaatatgctcgaagatggttgtgt cgttgttcatatatgcatcttcgttctgctgctcttgtcatccagtcaggcattcggtat attttagcagttcagagattgctgcatttaaagaatgctaaagcttctactgttatccag gcttggtggaggatgcggaagctccataatgtccatcagcaataccgatgggcaacagtt ctcgtccagtgttgttggagacagaagcttgctaaaagggcattgtggaaccttaaacat gctgcatatgaaactggagctttacgtgaagcaaaaggcaaactagagaggagcttagaa gatcttaccttgcgattcactttagagaggaggcaaaggctctctgctgaagagtcgaag acattggagatctctaagcttcttaaaatcttggaatcggtaaagtctgaattagaggca tcaaacgaagaaaataaaaataattgcaagaaaattgcctcactccaacatcagttagag ttatggaccaaggatcaagaagctctccgtaacagtctttctcagatagaagaagtgaag agggaaaatatttcactgaaggcaaagaacacagaaatggaacaagagctcttaaaagct caacaatgcagccatgataatatagacaagctgcatgatgtggaaaagaactatctgcat ctacgggataacttgcaaaacttggaggataagatctcaaatttggaagatgagaatcat ttattgagacagaaggccttaaacttatctcctaggcacagccgaactgggagccaccct ttggtggcttccccatgcagcccacggtcatcctttgaatcttcacctgtaaaactagca cctctcccgcaaaacctgacagaattaagaaggtcaaggatgaattctgatagacatgag gattatcatgaagtgctccaacggtgcatcaaagatgatatgggattcaagaagggaaaa ccagttgccgcctgtatcatttacaaatgccttctccattggggagtattcgaggctgaa agaacaactatttttgacttcataattcacacaatcaataccattcttaagacagaaaac gagaacagcattttgccgtactggctagcaaacgcttctgctcttctatgcatgttgcaa agaaacttaaggtcaaaaggattcatcacggcaccgtctcgatcttcttcagatactcac ttaagtgaaaaggcaaatgaaacattccggtctcctttgaaagcctttggacaacggata agcatgtcacacattgatgctcgatacccagccatgttatttaagcaacaactaactgct tccttggagaaaatctttggcttaattcgtgacactctgaagaaagagatatcaccactt ttaagcctttgcattcaggcaccaaaacttgctcaaggaggcactggtaggaggtcgaga tcacccgatgtgaccttgcagcaaccaataagtactcattgggatcggattataaagttt ttggacactttgatggataggctacataaaaattttgtgccttcttttttcatccgcaag ctagtaactcaagttttctccttcatcaatgtacagttgttcaatagtatgctcctacga cgagagtgttgcacattttcgaatggggaatatgtgaaatctgggctttgtgtactggag aaatggattgtggacactaaagaagagcatgcaggtgcagcttgggaggaactaaagtac atcagacaagcggttgactttctgatcattccacagaaaagcaaaaagaccctggagcag attacgaaaagtatttgcccggcgttaagtgtgagacaaatatatcgtctatgtactatg tactgggacgacaaatatggtactcatagtgtatcatctgaggttgttgcccaaatgaga gacatggtgagtaacgacgcacaaaatcctgtgtcaaattcatttcttctggatgatgac ttaagcattcctttcacgaccgaggaaatagcagcagaagtaccagccgtagacatgtcc aacatcgaaatgccctcatcgcttcgtcatgttcactctgctcagttcttgatgcagcac ctccaatcatcatactcatcgagacgaactgcctag

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