Phragmites australis (common reed): 133902990
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Entry
133902990 CDS
T10575
Name
(RefSeq) vacuolar-sorting protein BRO1-like
KO
K12200
programmed cell death 6-interacting protein
Organism
paua Phragmites australis (common reed)
Pathway
paua03250
Viral life cycle - HIV-1
paua03272
Virion - Hepatitis viruses
paua04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133902990
03272 Virion - Hepatitis viruses
133902990
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133902990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133902990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paua04147
]
133902990
Membrane trafficking [BR:
paua04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
133902990
Exosome [BR:
paua04147
]
Exosomal proteins
Proteins found in most exosomes
133902990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
iSirtuin
Motif
Other DBs
NCBI-GeneID:
133902990
NCBI-ProteinID:
XP_062200302
LinkDB
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Position
21:4872014..4877504
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AA seq
870 aa
AA seq
DB search
MASASNVMLAIHEKKTTATDLYRPLRLYIASAYSEREAAAADDDLCAVRDLRAAIEQPSL
PDASSLEQRRDALLAYARALALVEPRFPISPDRAHVHSLTFTWHDAFKGNKKCALASVHL
EKAAVLFNLGAVYSQIALSGDRSTDVGIRTACGAFQSAAGTFAWLKESGVAAKAVAAGAT
TVDVTPECAGMLEKLMLAQAQECFFEKVIAGGKPPALCSKVARQVGIFYEEAYAPLCAPP
LSQHFDKTWVSHVQLKAAQFYADACYRYSLDLHEKEQIAEEIARLKIGMGALADAKKAAR
GVAAQLLDSVNKLEGNMKTNLERAMKENERVYLMRVPAAGSLGALPAAPLAKPISLAEAL
DASKERLFSSLVPDGSMKALSKYTEMVDDIIRTQAEKLQQASEITRVRLKEMDLPDSILS
LEGNITLPFDLKEDIEAVQISGGPAGLEAELQQLRDLRRVNQELLVQTEELLQKEANEDA
QFRTQFGSRWTRPQSSTLTKNIQDRLNLFAANLKKASDSDSLIERGVKENYPLMSILDKR
PIESALPSISRPIMSLDGNEDAIVGALKQSLRQLESLGAQRAGLEDMLKEMKRKDDILPK
LMAGVGSHDDLFKKEIAKYDPICAEIADNIVAQEQLLLQIQAQNEQFATVFNLEDYKAAR
ERCYKQIAAAVAKYREIKKNINEGLNFYVTLQEAIGKIKQQCSDFIMTRNIQCREMIEDV
QRKLAGFNFSSSSHNSMQRNSSVPPDQSSPSPPPRAPHAQPPYAATPGGDSRPGYSQPEP
RPAYTQPYPPSYGAPPQQPPYGAPHPGQYHQQPPQQPPPGHDYGQPAYPGWRGPYYNAHQ
PQPQQPGPYPHPPYNAPGPYPPHQSYYRPQ
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcgtccaacgtgatgctcgcgatccacgagaagaagacgaccgccaccgac
ctctaccgcccgctccgcctctacatcgcctccgcctactcggagcgcgaggccgcagcg
gccgacgacgacctctgcgcggtgcgcgacctccgcgctgcgatcgagcagccctccctg
cccgacgcctcctccctcgagcagcgccgcgacgcgctcctcgcctacgcgcgcgcgctg
gcgctcgtggagccccgcttccccatctcccccgaccgcgcgcacgtccactccctcacc
ttcacctggcacgacgccttcaaggggaacaagaagtgcgccctggcctccgtccacctc
gagaaggccgccgtgctcttcaaccttggcgccgtctactcccagatcgcgctctccggg
gaccgctccaccgacgtcgggatcaggacggcgtgcggcgcgttccagagcgcggcgggg
acgttcgcatggctcaaggagagcggggtcgcggccaaggccgtcgccgcgggggccacc
accgtggacgtcacgcccgagtgtgcaggcatgttggagaagctcatgctggcgcaggcg
caggagtgcttcttcgagaaggtcatagctggagggaagccccccgcgctgtgctcgaag
gtggcgcggcaggtgggcatattctacgaggaagcttatgcacctctctgcgcacctcct
cttagtcagcacttcgataagacatgggtgtctcatgtccagctgaaggcagctcaattc
tacgctgatgcttgctataggtattcgttggatcttcatgagaaagaacaaattgctgag
gaaattgcacgcttaaagattggaatgggcgccttggcagatgccaagaaggctgcaagg
ggagttgctgcccagcttctggattctgtcaacaagctggagggtaacatgaaaaccaac
ttggagagggctatgaaggagaatgagcgtgtttacctgatgcgggttccagctgctggt
tccttgggagccctccctgcagcaccccttgcaaagcctatttctctggctgaagcttta
gatgctagcaaggaaaggcttttttcatcacttgtacccgatggcagcatgaaagcactc
tctaagtacactgaaatggtagacgatattatccggacccaggcggagaaactgcagcaa
gctagtgagatcactagagtcaggctgaaggaaatggacttaccagattctattctttca
ttggaaggtaatatcaccttaccctttgatctgaaggaagacatagaggctgtgcagata
agcggtggccctgctggcttggaagctgagttgcagcagcttagggatttgaggagggtc
aatcaggaactacttgttcagactgaagagcttctacagaaggaggcgaatgaagacgct
caatttcgtacgcaatttgggagtcgttggactagacctcaatcaagcaccctaacaaaa
aatattcaggatcgattgaatctatttgctgctaatcttaagaaagcttctgatagtgat
tctctgatcgaacgaggtgtgaaggagaactatcccttgatgtctattcttgacaaaaga
ccgatagagtctgcacttccaagcatttcgaggccaatcatgtccttggatgggaatgaa
gatgctattgttggagccctgaaacaaagcttgaggcaactggaatctctaggagcacaa
agggcaggtcttgaagacatgctcaaagaaatgaagagaaaggatgatatactgcctaag
ttgatggctggtgttggatcacatgatgatctttttaagaaggagattgcaaagtatgat
cctatatgtgctgaaattgcagataacattgtggcacaggaacaattattgctacaaata
caggcacaaaatgagcaattcgctactgtattcaatctagaggattacaaagctgctcgc
gagagatgttacaagcaaattgctgctgctgttgctaaataccgggaaattaagaagaac
atcaatgagggcctaaatttttatgtgactttacaggaagcaataggcaaaataaaacag
cagtgtagtgactttataatgacccgaaacattcaatgccgggaaatgatcgaagatgtg
cagaggaagctagcgggtttcaacttctcatcctccagccacaactctatgcagaggaac
tcttctgtaccacctgatcagagcagtccatcaccaccgccgcgtgctcctcacgctcag
cccccctatgctgctacacctgggggagactcaaggcctggatactctcaaccggagcca
agacctgcatacacacagccataccccccatcctatggcgcgccaccgcaacagcctccg
tatggcgcaccgcaccccggtcagtaccaccagcagccgccgcagcagccaccacccggt
catgactatggacaaccagcatatcctggatggcgcgggccgtactacaatgcgcatcaa
ccgcagccgcagcaaccggggccatatcctcatccaccgtacaatgccccggggccttac
cctccccaccagagctactacaggcctcaatga
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