Phragmites australis (common reed): 133903021
Help
Entry
133903021 CDS
T10575
Name
(RefSeq) KH domain-containing protein At4g18375-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133903021
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133903021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
DUF4573
Motif
Other DBs
NCBI-GeneID:
133903021
NCBI-ProteinID:
XP_062200337
LinkDB
All DBs
Position
21:complement(4882012..4888025)
Genome browser
AA seq
766 aa
AA seq
DB search
MDYGNSRSNSKKRTHFNSDDGKRKRLNSRHDDTSVSSEPIETIYRILCSVKKIGSVLGRG
GDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQSERADEAAENISNDGLENMKPHC
SAQDALLKIHDKIVVDEVVHDGAHEKSEIVDDVTARILVPGNQVGCLLGKGGSIIQQLRS
DTGAGIRVLPSENLPQCAIESDELVQISGAPSLVRKALYEISTRLHQHPRKENPPLEEII
DASTQRKRESPPPLQHGNPMLPHLRVDDPPPVPLLDSYRHGPLRYPVAEAEEFSVRILCA
SELIGLVIGKNGANVRQVEQQTGARIKVQEVDKDASGERLIIISSKEIPADPISPTIEAL
ILLHNKVSAPSEKHHLSTRLVVQSSKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKY
LSFDDELVQVAGPPAIARGALTEIASRLRTRTLRDASSANNPPPVAPFDGPPVDILPSRE
FTLYGRPANYPPYGRPAPAIDPPYGRPTNDPLYGRPAIDPPYGRPANDPPYGRPANDPPH
GRPYSNIPYGRLNESAHRDPSHAYPVDFFSKREYPSGSPLFVSNVPSSAYQRYAAPARLP
SRELPSSFSPGADYISHRSYRDHVPTDSYSSRGTQQLGVTRDGNSNAYEYTEAAGQMHGR
EDYRGLAATGRFSSTIELRIPNNSMESIIGVGGVNLAEIRQISGARLRLLEAHAGSSESV
VEIRGTLDQAKAAQSLLQGFISANSRGTQQPSQSQSSRMPHYPSWV
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggattatggtaattctagaagtaattccaaaaagaggacacatttcaattctgatgat
ggaaagaggaaacggttaaactccaggcatgatgacacatctgtgtcctctgagccaatt
gaaaccatttacaggatattgtgctcagtaaaaaagataggcagtgtcttagggagaggt
ggtgacattgttaaggcccttagagaggaaactaaagcaaagataagggttgctgattcc
attcctggtgcagacgagagagtaattatcatcttcaactaccaaaatcaatctgaacga
gctgacgaagcagctgaaaatatttctaatgatggcttagagaacatgaagcctcattgt
tctgcccaagatgccttgttgaagatacatgataagattgttgtggacgaagttgttcat
gacggagcccacgaaaagtctgaaattgttgatgatgtgactgctcgaattttggttcca
ggcaatcaagttggctgcctgctaggaaaaggtggctctattatacaacaactgcggagt
gatactggtgcagggatccgtgtcttgccatccgaaaaccttccccagtgtgcaattgaa
agtgatgaactggtgcagatatccggagcaccttctcttgtaagaaaagctctctatgaa
atatctactcgtctccatcaacatcctcgtaaagaaaatccacctcttgaagaaataata
gatgcaagcacacaaaggaaacgcgagtctccaccaccattacaacatgggaatccaatg
ttgccacacctgcgtgttgatgatccaccacctgtacccttgcttgattcatatagacat
ggaccattgcgatatcctgttgctgaagctgaagagttttctgtcagaattctgtgtgct
tctgagctcattggtttagttattgggaaaaacggggccaatgttcggcaggtagaacag
cagactggtgctcgcattaaggttcaagaagttgacaaagatgcttctggagaaaggctg
attattatttcatctaaggagataccagctgatccaatatccccaacaattgaggcactt
attttgctccataataaagtaagtgcaccttctgagaaacaccatttgagtacaaggctt
gttgtacaatcaagcaaagttggctgtattcttggggaaggtgggaaggtaattactgaa
atgagaaggcgaactggggctgaaattcgagtttactcgaaggcagataaaccaaagtac
ttgtcttttgatgacgagcttgtgcaggttgctgggcctccagctatcgcaagaggagcc
ctcacagagattgcttcgagacttagaactaggactttgagagatgcaagttctgccaat
aatcctccacctgttgccccttttgatggtcctcctgttgatatattgcctagcagggaa
ttcacattatatggaagacctgccaattatccaccatatggaaggcccgcacctgccatt
gatccaccatatggaagacctaccaatgatccactgtatggaaggcctgccattgatcca
ccatatggaaggcctgccaacgatccaccttacggaaggcctgccaacgatccaccacac
ggaagaccttatagtaatataccatatggaagactaaacgaaagtgcacatcgtgatcct
tcccatgcatatcctgtagatttcttttctaaaagagaatatcctagtggaagccctctg
tttgttagtaatgtcccatcatctgcttatcagagatatgcagcacctgctcgcttgcct
agtagagaacttccctcgtcttttagtcctggtgcggattatatatcccatcgttcttat
cgtgaccatgtgcctactgatagctactctagtaggggtacacagcaattaggcgtcaca
agagatggaaattcaaatgcttatgaatatactgaggctgctggacagatgcatggacgt
gaggactatcgaggacttgctgccactggcaggttctcaagcactattgaactgaggatt
ccaaataattccatggaatctattattggagttggtggggtcaatctagcggagatccgt
cagatttctggtgcaagactgaggttacttgaagctcatgctggttcttccgagtctgta
gtggagatccggggcacgctggaccaagcgaaagctgcgcagagccttctgcaaggcttc
attagcgctaacagccgaggcacgcagcagccatcccaatcccagtcttctcgcatgcca
cattacccaagctgggtctag
DBGET
integrated database retrieval system
