Phragmites australis (common reed): 133903040
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Entry
133903040 CDS
T10575
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133903040
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133903040
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
DUF7605
Motif
Other DBs
NCBI-GeneID:
133903040
NCBI-ProteinID:
XP_062200367
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Position
21:complement(1063515..1067049)
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AA seq
448 aa
AA seq
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MTDPSAAAAEVGAHASLPPPAAEEADSAAAEEAAATAKRWPGWPGDSVFRLVVPVLKVGS
IIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVSGKEDPSLELPPATDALMRVFKRV
NGIADGAAEGTQAAAAPSVCAARLLVPGAQAINLIGKQGATIKAIQEGTGATIRVISVDE
RERPFYVTEDERIVEIQGETERVVKALQAVSNHLRKFLVDHSVLPLFEKTNTTVSQDHGG
DGWSDMSHPSIGSTQVNQPPSVVDEYILPVKRDLLFLEREHLVDHNIHRSGVSLYGRDPA
LSTLRPPGIHGAGHLLTQITQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGS
PDDITVEIKGTSSQVQAAQQLIQDSLAAHREPVRSSYVGAGLDPVYRSSYSQYGSSTYPS
SSLPSYSSIDDGRYPSSGLGGYGSSYRY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccatccgctgccgccgcggaggtcggggcgcacgcatcgctgcccccgccg
gccgccgaggaggccgattccgcagcggcggaggaggctgcggcgaccgcgaagaggtgg
cccggatggcccggggacagcgtgttccggctggtggtgccggtgctgaaggtcgggagc
atcatcgggcggaagggcgagctcatcaagcgcctcgtcgaggaaaccaaggccagggtc
cgcgtcctcgagggccccgtcggcgccaccgagcgcattgttttggtgtccggaaaagaa
gacccaagcttggagctgcctccagctactgatgctctgatgagagtttttaaacgtgtc
aatggaatagcagacggagctgctgagggtactcaggcagctgctgcacccagtgtatgt
gctgcccgattgttggttcctggggctcaagcaattaacctaattgggaagcaaggtgcc
acaatcaaggcaatccaggagggcacgggtgctacaatacgggttatatcagtagatgaa
cgagagcgaccgttctatgtaactgaagatgaaaggatagttgagatacaaggtgaaaca
gagagagttgtaaaagcacttcaagcagtttctaaccatctgcggaaatttttggttgac
catagtgtgcttccattatttgaaaagactaatactacggtgagtcaagaccatggtggt
gatggttggagtgatatgtcacatccttcaattggttctacacaagtaaaccaaccacct
tcggtagttgatgaatatattcttccggtgaagagggatctcttgtttcttgaacgagaa
catttggtagatcataacattcatcgctcaggcgtatcactttatgggcgggatcctgcc
ttgtcaacattacgaccccctgggatacatggtgctggccatctacttacacagataact
cagaccatgcagatcccacttacatatgcagaagacattataggagttaaaggagcaaac
attgcatacatacgagctaatagtggggctgttgtcacaattcaggagagtttgggtagc
cctgatgatattactgttgaaataaaggggacatcgtcgcaggtacaagctgcccaacag
ctcatccaggactcgttggctgcacacagagaacctgtcaggagcagctatgtaggggca
ggattagatccagtgtataggtccagctactcacagtatggcagctccacctatccatcg
tcatcgctgccatcttattctagcatcgatgatggtagatatccgtcttcaggtctgggc
gggtatgggtcgagttaccggtactag
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