Phragmites australis (common reed): 133903059
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Entry
133903059 CDS
T10575
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa-like
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133903059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133903059
Spliceosome [BR:
paua03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
133903059
Complex B
133903059
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Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
133903059
NCBI-ProteinID:
XP_062200388
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Position
21:22899065..22904234
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AA seq
487 aa
AA seq
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MGDYGHGGPMRGPNQDSRPKGGQRPNIQQLKLMGQIHPTGLTPNLLKLFEPRPPLEYKPP
LEKRKLPAYTGMAQFVSHFAEPGDPEYAPPVPKCETRDEKKARIRMNKLEQGAAMVAEEL
QKYDPQSDPNATGDPYKTLFVARLNYETPEHRIKREFEAYGPVKRVRLVTDKDTNKPRGY
AFIEYMHTRDMKNAYKQADGKKVDGKRVIVDVERGRTVPNWRPRRLGGGLGSSRIGGENA
DKKDSAREQQPAGRPRSEEPRRDDRRADRDREKSREKVRERDRDERTRERSHDRTRDRDS
REEKHHHRDRERTRDRERGKDRERDHGRDRDRDRRDRDRDRDRGRDNDREKDRDRHRERG
RDRDRDYERASRERDRGHLHDKDADYGSGVPKHDKNLSNYGQDYDYSQYEQHKGHEAYGY
GQDGRGRETEHSKRHEHEYYRVDSLGKMEANYQVQPSNAEPEGPEEGEAYEEGDYQYHRA
GDHMNDS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgggcgactacggccacggcgggccgatgcgggggccgaaccaggactcgcgccccaag
gggggtcagcgccccaacatccagcagctcaaactcatggggcagatccacccgacgggg
ctcacaccaaacctgctcaagctcttcgagccgcgcccgccgctcgagtacaagccaccg
ctcgagaagcgcaagttgccagcctacaccgggatggcgcagttcgtgtcgcacttcgcc
gagcctggggatcctgagtacgccccgccggtgcccaagtgcgagacaagggatgaaaag
aaggctaggatccgcatgaataagctggagcaaggtgcagctatggttgctgaagaactt
cagaaatatgacccacaaagtgacccgaatgccaccggagacccttacaaaacactcttt
gttgcaagacttaattatgagacgcccgagcataggattaaacgggagtttgaagcttat
gggcctgttaaaagggtgcggcttgtaactgacaaggatacaaataaacctagaggatat
gcattcatcgaatatatgcacactcgggacatgaaaaatgcttacaagcaggcagatggg
aaaaaagtggatggtaagagggtaatagttgatgtggagcgtggtagaactgttccaaat
tggcgtcccaggagattgggtggtggtcttggatcaagcaggattggtggtgagaacgct
gacaagaaggattctgctagggagcaacagcctgctgggcgccctagatcagaggagcct
aggagggatgatcgtcgtgcagatagggatcgggagaagtctcgtgaaaaggtacgggaa
agagatcgtgatgagaggacacgtgaacgctcacatgaccggactcgtgatcgtgattca
agagaagagaagcaccaccatagagaccgtgagaggactcgggacagggagcgagggaag
gaccgggaaagagaccatgggcgtgaccgtgatcgtgatcgccgtgacagagatagggac
agggatcgtggtcgggacaatgatagagaaaaggaccgtgatcgccatcgtgagaggggc
agggaccgtgacagagattatgagcgtgccagtcgtgaacgggaccgtggtcacttgcat
gacaaggatgccgactatggcagtggtgtgccaaaacatgacaaaaatctgtccaactat
gggcaggattatgattatagccagtatgagcaacacaaaggtcatgaggcctatggttat
ggccaagatggacgcggccgtgaaactgagcactcaaagcggcatgagcatgagtactat
cgtgttgactcgttagggaagatggaagccaattatcaggtgcaacctagcaatgctgaa
cctgagggccctgaggaaggtgaggcatatgaggagggcgactaccagtatcaccgagca
ggtgaccacatgaatgattcttga
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