Phragmites australis (common reed): 133903069
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Entry
133903069 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133903069
KO
K23288
syndetin
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133903069
Membrane trafficking [BR:
paua04131
]
Protein recycling
Others
EARP complex
133903069
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
EXOC6_Sec15_N
Vps54
Motif
Other DBs
NCBI-GeneID:
133903069
NCBI-ProteinID:
XP_062200402
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Position
21:complement(2063028..2073453)
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AA seq
1085 aa
AA seq
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MRRDTPPSTAPSASSSSSSLFGGEQLFESAPSPLIFLPLLLIQGGGMDLSGVGEKLLSSV
RSARSLGLLPPTPAAPPPRPEVPERAAAAAAAARAIAGLPPHERISLPANSEDLVSIYGS
NPQGQPVEKLEEVFYEEEFDPINYILQSIPDEGGDATYFDKQSTLRLAQLDKIAERLSHH
VMGHHEEMVKGMQLVMELEQDLKVANVICMNGRRHITSSKNEMSRDLVVNVKSKKKQDLL
DVLPILTELRHALDMQMELETLVEKENYFQAFQLLPEYLQVLENYSGLSAVQEMGRWIET
WLAQTIQKLDTHLLGVCQTFNEESYLTVIDAYALMGDIGGMAEKMQSFFLQEVLSQTHFV
LKEMLEEDVGNNTQRNRFTYSDLCVQVPECKLRPCLLRTLKNLFSLMCSYYAIMSFAPGE
KNIESKGPDLAYKNNTPQSSNEPLVDSGRGHSSVAVIQDGSAPEKTDRKSSPEVSNPDAS
TSGMGSPFYQLRTDATKLVAHTFERGRRNLWQLATSRLSVLLSSSSVCSTSTYQFLKNYE
DLTIFILAGEAFCGFEASEFRQKLKTVCLNYVVSFHRQNIYALKMVLEKESWTIMSAEAS
QIISLAGLTGDGAALISPTGSSSNLPIYSYRGNSTTDNSGKQKNGFSSWLKIENPFSSKL
ENGTVESPKSNMFFNSSASNNHGNGNNSSFDEENEDLLADFIDEDSQLPSRIPKPKIVKG
NSAHWKDGDISSQTGSSLSLLRMMDKYARLMQKLESVNVELFKGISQLFSIFYHCIYETF
GHQDRSQSGKPLPDYQSFRLKAALSKITQDSDQWIKSQNISYSPSSPLSMNSTFAQMDVM
PTAPPSSMFTSYGLKERCAAAETISLVARVLNRSRAHLHSVLSKNNTSVVEEFYRTLVDS
VPDLAEHIHRTSARMLLHIDGYPDKIANAKWEVKELGIEHNGYVDLLLGEFKHYKTRLDH
GGISKELQHLLLEYGIESVTEVLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHIVSANV
KPKLQTVDTFIKAYYLPETEYVHWARSHPEYSKSQVVGLVNLVATMKGWKRKTRLETVEK
IEAGP
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgagacacgccgccgtccactgccccttcagcctcctcctcgtcctcctctctc
ttcggcggcgagcagctgttcgagtccgcgcccagcccgctcatcttcctgcccctgctc
ctgatccagggcggcggtatggacctctccggcgtcggcgagaagctcctcagctcagtc
cgctccgcccgctccctcggcctcctccccccgacccctgccgcgccccctccccgcccc
gaggttccagaacgagctgcggctgcggcagcagctgcgcgtgcgatcgcggggttgcca
ccgcacgagaggatcagcctgccggcgaattcagaggatttggtctccatctacgggagc
aacccacaggggcagcccgtggagaagctcgaggaggtgttttatgaggaggagttcgat
ccaataaattacattctgcaaagtattccggatgaaggcggcgatgccacctattttgat
aagcagtctacgttgagattagcgcagcttgacaagattgcagaacgattgtcccatcat
gttatgggtcaccatgaagaaatggtgaaggggatgcagttagtgatggaattagaacaa
gacttaaaggttgctaatgtaatctgcatgaatggacgaaggcatataacctcttcaaag
aatgagatgtcaagggatctggttgtgaatgtaaaatcaaagaagaaacaagatttgctg
gatgttcttcctattcttacagagcttcgtcatgcactagacatgcagatggaacttgaa
actttagttgagaaagagaattactttcaggcattccaattattgcccgaatatttgcaa
gtcttggagaattattcaggcctttctgccgtacaagaaatgggacgatggattgagaca
tggttagctcagacaatccaaaagttggacacccatttactaggtgtatgtcagaccttc
aacgaagaaagctatctaactgtaattgatgcatatgcactgatgggtgacattggtggc
atggctgaaaagatgcagagtttctttttgcaggaagtactctctcagacacattttgtc
ctgaaagaaatgttggaagaggatgtgggaaataatacgcagagaaataggtttacatat
agcgatctttgtgttcaagttcctgagtgcaaacttcgcccctgtttattaagaaccctt
aagaacttattttcattgatgtgctcatattatgctattatgagctttgccccaggagaa
aagaatattgagtccaagggcccagatctggcatacaagaataacacacctcagagtagc
aatgaacctttagttgattcaggaagaggtcattcaagtgtagcagtcattcaggatggt
tctgcacctgaaaagactgacagaaaatcatcacctgaggtcagcaatcctgatgctagt
acatcaggaatgggttctccgttctatcagctgaggacagatgctacaaagcttgttgcg
catacatttgaaagagggcgaagaaatctttggcaactggcaacaagtcgcttatctgtc
ttactgtctagttcgtctgtttgttcaactagcacataccaattcctgaagaactatgaa
gatctcaccatttttattttggctggtgaagcattttgtgggtttgaagctagcgagttc
cgccagaagttgaagactgtctgtttgaactacgtagtgtcctttcaccgccaaaatata
tatgcacttaagatggtactggaaaaggaatcttggacaataatgtctgctgaagcttca
cagataattagtttagcaggcctaactggtgatggtgctgcattgatctctcctaccggt
agtagttccaacttgccaatatattcttaccgtgggaattctactacggacaattcagga
aagcaaaagaatggattttcttcttggcttaagattgaaaacccattttcttctaagcta
gaaaatggcactgtggaatccccaaagtccaatatgtttttcaactcatcagctagcaat
aatcatggcaatggaaataattcatcgtttgatgaagagaatgaagaccttcttgcagat
ttcattgacgaagatagtcagttgcctagtaggataccaaaaccaaaaattgtaaaaggc
aattctgcacattggaaagatggagatatttcatcgcagacaggctcatcactttctttg
ttaaggatgatggacaaatatgccagactaatgcaaaagctggaaagtgtcaatgttgag
ctttttaagggtatctcccaactgtttagcatcttctatcactgcatatatgagacattt
gggcaccaagacaggagtcaaagtggcaagcctttaccagattatcaatcatttcggctt
aaagcagctttatcaaaaataacacaagactctgatcagtggataaaatcacagaatatt
tcatattcaccttcatcacctttgtcaatgaattcaacttttgctcaaatggatgtgatg
cctactgcacctcccagctcaatgttcacctcctatggattaaaggagagatgtgcagct
gctgaaacaatatcgttggtcgctcgagttttgaacagatctagagcccatctacactca
gtgttgtcaaaaaataacacttctgttgtagaagagttctacaggacactggtggattct
gttccagatttggctgagcacattcataggacaagtgcacggatgcttttgcatattgat
gggtacccagataagattgcaaatgctaaatgggaggtgaaggagcttggcatagagcat
aatggatatgttgacttgttattgggtgaattcaaacactacaaaacaagattggaccat
ggaggaatttctaaggagctccaacacctcttgctggagtatggcatagagagcgtcaca
gaagttttagtcgaaggtctctctagagtgaaacggtgcactgatgaagggcgtgctttg
atgtcacttgacctccaggtactaattaatggactgcaacacattgtatcagcgaatgtt
aagccaaagctgcaaactgtggacactttcataaaggcttactatttgccagagaccgag
tatgttcactgggcacggtctcatccagaatacagcaaaagtcaggtcgtcgggttggtt
aacctggtggccaccatgaaaggatggaaacggaaaacgagattggaaacggtggagaag
attgaggcagggccatag
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