Phragmites australis (common reed): 133903512
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Entry
133903512 CDS
T10575
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
Spliceosome [BR:
paua03041
]
Complex A
U1 snRNP components
U1 related factors
133903512
Complex B
133903512
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NCBI-GeneID:
133903512
NCBI-ProteinID:
XP_062200912
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Position
2:complement(22586508..22600805)
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AA seq
993 aa
AA seq
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MASNMQPSGPPQPPRPPMMGSSAPQQNLGPPMPMQFRPVVPPQQHPQFMQPAAQQFRPVG
QPMPGANIGMPGQMPHFPQPGQHLPHSGQVPPSSQAVPMAYQPARPMSSAPLQPQQQAAY
PGGHLSTMGAPMPPPSYTYQPTSVPPVMQPWGTTPGQSVPHVTALVQPGHQPVSAPATLP
PVNSSEPSSSDWQEHTAIDGKKYYFNKKTRQSSWEKPVELMTPLERADASTEWKEFTTPE
GRKYYYNKVTKQSKWTIPDELKIARELAEKASNQQPDRETGTTAGALVGSASAEPSTVPA
NQSSSVVGIIASSSHDGNSVPPGAVPSHNVDHTTSSSNVSMQNGGPSTSVPVTTSTEVPL
VATDSGTSRNNNDNSSVISAADTEDGTSASDLEEAKKTMPVAGKINVTPVEEKASEEEPV
VYANKLDAKNAFKTLLESVNVESDWTWDQAMRIIINDKRYGALKTLGERKQAFNEYLNQR
KKFEAEEKRVKQRKARDDFLVMLEECKELTSSTRWSKAILMFEDDERFKAVERPREREDL
FENYVVELHKKEKAKAAEEHKRHVAEYRAFLESCDFIKATTQWRKVQERLEDDERCSRLE
KIDRLEFFQEYIRHLEKEEEELKRIQKEQARRQERKNRDEFRKMLEEHVADGTLTARTRW
RDYCAQIKESHAYLAVASNSSGSTPKELFDGVMEELDKQYQDDKDQIKEAVKSGKIPMTT
SWMLEEFQTAVLEDDALKGLSLINIKLIYDDQIERLREKEQKEAKKRQRLGENFSDLLYS
IKEISSSSTWDDSKQLFEDSQEFRALDSETYAKELFEECVVHLKERLKEKERLREEEKAK
REKEREEKERKKEKEKEKERKDKERKEKERDREKEREKEKGKDRSRRDDMEIDGADVDTH
GSKDKKREKDKEKKHKRRHHDTDDVSSERDDKDDSKKSRRHNSDRKKSRKHTHASDSDSE
NRHKRHKKDRDSSRRNGAHELEDGELGEDGEVH
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaatatgcagccttctgggccacctcagcctcccagacctcccatgatgggt
tctagcgctccacaacaaaatcttggaccaccaatgcctatgcagtttaggccagtggtt
cctccacagcagcatcctcaattcatgcaaccagcggcgcagcagtttcgaccagttggt
cagcctatgccaggagctaacattggcatgcccgggcagatgccacattttccgcaacct
gggcagcatttacctcactcaggtcaggttccaccctcatcccaagcagttcctatggca
tatcagccagctagaccaatgtcatcagcaccactgcagccgcagcagcaagctgcgtat
cctggtggccatttgtccaccatgggtgcccctatgccacctccatcctacacgtatcaa
ccaacatcggttcctcctgtaatgcaaccctggggtacaactccaggccagagcgtacct
catgtgacagctctggtgcagcctgggcatcagccagtgtcagctccagcaaccttgcct
ccagtcaactcatctgaacctagctcttcggattggcaagaacacactgcgattgatgga
aaaaagtactacttcaataagaagacaaggcagtcaagttgggagaaacctgttgagttg
atgacacctttggagagggctgacgcctcgactgaatggaaggagtttactacaccagaa
ggtcgaaagtactattacaacaaagtgacaaagcaatcgaaatggactattcctgatgag
ttaaagattgcacgtgaattggcagaaaaggcatcgaatcaacaacctgaccgagaaaca
ggaacaactgctggtgctcttgtcggatctgcttctgcggagccctctactgtacctgct
aatcagtcttcatctgtagtcggtataattgcttccagctcgcatgatggaaactctgtt
cctcctggtgctgtcccatcacataatgtggaccacaccaccagttcttccaatgttagc
atgcaaaatggtggtccaagtacttctgttcctgttacaacaagcactgaagttccatta
gttgcaactgattcagggactagcagaaacaataatgataattcatctgtaataagtgct
gctgacacagaagatggtacatccgcttcagatttggaggaggccaaaaagaccatgcca
gtcgcagggaagatcaatgtcacgccagtggaggagaaagcaagtgaagaagaacccgta
gtctatgccaataagttggatgcaaaaaatgcattcaagaccctgcttgagtcagtaaat
gttgagtctgattggacatgggatcaggctatgagaattatcataaatgacaaacgatat
ggcgctttgaaaactcttggagagagaaagcaagcttttaatgagtacttgaaccagcga
aaaaagtttgaagccgaagaaaaacgtgtcaaacagaggaaagcacgtgatgatttcctt
gtgatgcttgaagaatgcaaggagcttacatcgtcgacaagatggagcaaagcaatactt
atgtttgaagatgatgaaaggttcaaagctgtagagcgtcctagggagcgagaggattta
tttgagaactatgttgtggaactacataaaaaggagaaagccaaggctgctgaagaacac
aaaaggcatgtagcggaatacagagcttttctggaatcatgtgatttcatcaaggcaact
acccagtggagaaaagttcaagaacggctggaagatgatgaacgctgttcccgacttgaa
aagattgatcgcttggaattttttcaagagtatatacgacatctggagaaagaagaggaa
gagctgaagaggatacaaaaggagcaagcaaggcgacaagagaggaaaaatcgtgatgag
tttcgtaaaatgttggaagaacatgtcgccgatggcacacttactgcaagaactcggtgg
cgtgattattgtgcacagataaaggagtcacatgcttacttggcagtagcctcaaactcg
tctggttcgacgccaaaagagctctttgacggtgtgatggaggagcttgacaaacagtat
caagatgacaaggaccaaattaaggaagcagtgaaatctggaaagattcctatgacaacc
tcatggatgttagaggaattccaaactgctgttctggaggatgacgctcttaaaggatta
tctttaatcaacatcaagcttatttatgatgatcagattgaaaggctcagggaaaaggag
caaaaggaggccaagaaacgccagcgattgggtgaaaatttttcagatcttctgtattca
atcaaggaaatatcatcttcttcaacatgggatgattctaaacaactattcgaagacagc
caagagttcagggccttggacagtgaaacttacgctaaagagctttttgaagagtgtgtt
gtccacctgaaagaaaggttaaaagagaaagagcgtctgagggaggaagagaaggcaaaa
agagagaaagagcgtgaagagaaagagaggaagaaagagaaagagaaagagaaagaaagg
aaggataaagaacgcaaagaaaaagaaagagaccgggagaaagaaagagaaaaggaaaaa
ggaaaggatcgatcaaggagagatgacatggagattgatggtgctgatgtggacacccat
ggttcaaaagataagaaaagagagaaagataaagaaaagaagcataagagacgccaccat
gacacagatgatgtaagctcagaaagggacgataaggacgactctaagaagtctcggagg
cataacagtgatcgcaagaaatctaggaagcatacacatgcttcagactcggatagtgaa
aaccggcacaaaagacataaaaaggatcgagatagttcccgaagaaatggtgcacatgag
cttgaagatggtgaacttggagaagatggggaggtccattag
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