Phragmites australis (common reed): 133903864
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Entry
133903864 CDS
T10575
Name
(RefSeq) transcription factor-like protein DPB
KO
K04683
transcription factor Dp-1
Organism
paua Phragmites australis (common reed)
Pathway
paua03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133903864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133903864
03036 Chromosome and associated proteins [BR:
paua03036
]
133903864
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
133903864
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
133903864
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
133903864
NCBI-ProteinID:
XP_062201320
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Position
21:complement(9028349..9034695)
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AA seq
349 aa
AA seq
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MVPGARPSGGGAHSVTTTSGGGAHSVTTTSGGCSPSDRVAPAPSASVSTPASGSTVARRL
NGLGLQGDDAPSSQPAASKKKKRGARAVGPDKNGRGLRQFSMRVCEKVESKGRTTYNEVA
DELVSEFIDPNNNLESPDPDNPSAQQYDEKNIRRRVYDALNVLMAMEIISKDKKEIQWKG
LPQTSMNDVEELKKEIIGMKGRIDKKSAYLQDLQDQYVSLQNLVQRNEQLYGSGDAPSGG
VALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELQDDSFVLKAMGLSGKEEIDGTQ
APVANGGECSSTPNDYWHQSPQPARPRGIRLPNSPPIPGILKGRVKHEH
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggtccccggcgcccggccttctggcggcggtgcccactccgtcaccaccaccagcggc
ggcggcgcccactccgtcaccaccaccagcggcggctgctccccatccgacagggtcgcc
cctgctccctcggcctcagtctccacgccggccagcgggagcaccgtcgcccgccgcctc
aacggcctcggcctccagggcgacgacgcgccctcgtcgcagcccgccgcgagcaagaag
aaaaagagaggtgcacgtgcagttggtcctgacaaaaatggccgtggattgcgccaattc
agcatgagagtctgtgagaaagttgaaagcaaagggagaacaacctacaacgaggtggca
gatgaactggtttctgaatttatagaccccaataataatctcgaatctccggatcctgat
aatccctccgcgcaacaatatgatgagaaaaatattcgaagaagagtttatgatgcgctg
aatgtcctaatggctatggaaattatatctaaagataaaaaggaaatacagtggaaaggc
ttgcctcagacgagtatgaatgatgttgaagaattgaagaaagagatcattggaatgaaa
ggtcggattgacaagaaaagtgcatatttgcaggatttacaagatcaatatgtaagtctc
caaaacctggtacaaagaaatgagcagctatatgggtcaggagatgcaccttctggtgga
gtggccttgccatttatactagttcagacacgccctcatgcaactgtagaagtggagata
tcagaagatatgcagttggtgcattttgacttcaatagcactccatttgagttgcaggat
gattcctttgtattgaaagcaatggggttatctggtaaagaagaaattgatggcacccaa
gctccagttgcaaatggcggtgagtgctcaagtacaccaaatgattattggcatcaatca
ccgcaacctgcgaggccaagaggaattaggctaccaaactcacctcctattccagggata
cttaaagggcgcgtaaagcatgaacactag
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