Phragmites australis (common reed): 133904290
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Entry
133904290 CDS
T10575
Name
(RefSeq) regulatory-associated protein of TOR 1-like isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
paua Phragmites australis (common reed)
Pathway
paua04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133904290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133904290
Membrane trafficking [BR:
paua04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
133904290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
HEAT
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_EML
HEAT_EZ
HEAT_2
DUF4042
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
133904290
NCBI-ProteinID:
XP_062201737
LinkDB
All DBs
Position
22:complement(619003..629142)
Genome browser
AA seq
1357 aa
AA seq
DB search
MALGDLMASRLVRSSSSPSPAAPSASLPNHHHNHVTDDLPVVNGPEPRNRLEADEEKPAP
VAHLPQVVVLCEQSLEGLDEAAAAAAGPSTSGLVSKWRQKDRMKTGCVALVLCLNISVDP
PDVIKISPCARMECWIDPFSMAPPKALESIGKTLHSQYERWQPKARYKLQLDPTVEEVKK
LCNTCRKYARSERVLFHYNGHGVPKPTANGEIWVFNKSYTQYIPLPITDLDSWLKTPSIY
VFDCSAAGIVVKAFLERLDWSSSSSASSLKDCILLAACEAHQTLPQSAEYPADVFTACLT
TPIKMALHWFCKRSLLRGSLDHSLIDQIPGRQNDRKTLLGELNWIFTAITDTIAWNVLPH
DLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPICFPLLPPTHQHHMWDAWDMAAEICL
SKLPQLIADPNVEFQPSPFFTEQLTAFEIWLDHGSEEKKHPEQLPIVLQVLLSQSHRFRA
LVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTSAMELRQILVFIWTKILSLDKSCQVDL
VKDGGHAYFIRFLDSLDAYPEQRAMAAFVLAVIVDGHKRGQEACINAGLIDVCLRHLQPE
NPHDAQTEPLLLQWLCLCLGKLWEDFPEAQLLGLQSNAPDIVICLLSEPQSEVRASAVFA
LGNLLDMGSSSLNGADDDSDDDEKVKAEINVVRSLLQVSSDGSPLVRFEVAIALTRFALG
HNKHLKSIAAEYWKPQTNSLLKSLPSLANVSNPSNVYSPNNILQGSSGLASHIGPVLRVG
SDSSATGRDGRISTSSPIATNSIMHGSPQSDDSSQLSDSGILLKENATNGGLSYTRSKPI
DSGIYSQFISTMCSVAKDPYPRIATIGRRALSLIGVEQVVMKHTRFNSGGAHQGETSAPL
SNFGMARSSSWFDMNSGNFSMAFRTPPVSPPQHDYLTGLRRVCSMEFRPHLMNSPEGLAD
PLLSPAAAPSNAELSILPQSAIYNWSCGHFSRPLLTGSDDNEGTNARREERERIALDCIA
KCQRSSACKMTSQIASWDTRFELGTKAALLMPFSPIVVAADENEQIRVWNYDDALPVNTF
ENHKLSDRGLTKLLLINELDESLLLAASSDGNVRIWKNFTQKGGQKLVTAFSSVQGHRAA
GRSIVIDWQQQSGYLYASGDMSSILVWDLDKEQLLSTIQSSADSAISALSASQVHSGHFA
AGFADASVRIFDVRTPDRLVYMARPHAPRTEKVVGIGFQPGFDPYKIVSASQAGDIQFLD
VRRAAEPYLTIEAHRGSLTALAVHRYAPVVASGSAKQMIKVFSLEGEQLTIIRYQPSFMG
QRIGSVNCLSFHPYKSLLAAGAGDNALVSIYAEENYK
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggagatctcatggcgtccaggctcgtgcgctcgtcgtcctcgccgtcgccg
gccgcgccctcggcgtcactgccgaatcaccaccacaaccacgtcacggatgacctccct
gtcgtgaacggaccagagcccagaaataggctggaggccgatgaggagaagccagcgccg
gtggcgcacctgccccaggtggtggtgctgtgcgagcagagcctcgaggggctcgacgag
gctgcggctgctgctgcagggccctctaccagcgggctcgtctccaagtggcggcaaaaa
gaccggatgaagactggatgtgttgcacttgtattatgtttaaacatcagtgttgatccg
ccagatgtaattaaaatttccccttgtgcaagaatggagtgctggatagatccattttct
atggcacctccaaaagccctcgaaagtattggaaaaacattgcactcgcagtacgaacga
tggcaaccgaaggctcgttacaagcttcagctggatccaacagtggaggaagttaagaag
ctttgtaatacttgccgcaaatatgccagatcagagagagtccttttccattataacggt
catggtgtaccaaaacctacagccaatggtgagatttgggtgtttaacaagagttacacc
cagtatattccgcttcctattactgatcttgattcatggctaaaaacaccttcaatttat
gtctttgactgctcagctgctggaattgttgttaaagcttttcttgagcgcctagactgg
agttctagcagctctgcatcttcactgaaggattgcattcttcttgctgcctgcgaagca
catcaaactctcccccagagtgcagaatatcctgctgacgtgtttacagcttgcctcaca
acacccatcaaaatggcattgcactggttttgtaagagatcattactccgtggttctctg
gatcattctcttatcgaccaaattcctggaaggcaaaatgaccgtaaaactcttcttggg
gagctgaactggattttcactgctattactgatactattgcatggaatgttcttcctcat
gatctattccaaaggcttttcaggcaagatcttctggttgctagtctctttcgcaacttc
ttacttgctgagagaatcatgcgatctgcaaattgttctccaatctgtttcccattgtta
ccaccaacacatcaacaccatatgtgggatgcatgggacatggctgctgagatctgcctt
tccaagcttcctcaattaattgctgatccaaatgtggagtttcagccgagcccatttttt
acggaacaattgacggcttttgaaatatggcttgatcatggctctgaggagaagaaacac
cctgaacagttacctatagttcttcaggtcctgcttagtcaatctcacagattcagagca
cttgttctgcttggaagatttcttgacatgggaccatgggcagttgatttggccttgtct
gtcggaatcttcccttatgtactcaaactgcttcaaacaagtgcaatggagttgcgtcaa
attcttgtgttcatatggacaaaaattctctctcttgataagtcatgtcaggttgacttg
gttaaagatggagggcatgcatattttatcaggtttcttgacagtttggatgcttaccca
gagcagcgtgcaatggccgctttcgttttagcagttattgtggatgggcataagaggggt
caagaggcttgtattaatgcaggtcttatagatgtttgcctgagacatcttcaacctgag
aatccacatgatgcacagacagagcctttgcttttgcagtggctttgtttatgcctcggc
aaactctgggaagatttccctgaggctcagttgcttggtctgcaatcaaatgcaccagac
attgttatatgtctattatcggagcctcaatctgaggtcagagcttctgctgtttttgca
cttgggaatctcctggatatgggatcttcatcattaaatggagctgatgatgattctgat
gatgatgaaaaggtgaaagctgaaataaatgttgttcgaagccttctgcaggtctcttca
gatggtagtccccttgttagatttgaggttgctatagcgcttacccgctttgcattgggt
cacaacaaacatctcaaatctattgctgctgagtattggaaacctcaaaccaattctttg
ctgaagtcactaccatcattggctaatgtaagcaatccaagcaatgtttatagccccaac
aacattctacaaggcagcagtggccttgcttctcatattggtcctgtgctaagggtcggc
agtgatagcagtgccactggccgtgatggaagaatttctacaagcagcccaattgcgaca
aatagcatcatgcatggctcaccccagtcagatgattcttcccaactctctgattcaggc
atattactgaaagagaatgcaactaatggtggtctcagctacaccaggtcaaagcctatt
gatagtggaatttattctcaatttatatcaactatgtgttctgttgctaaagatccatac
ccaagaattgcaactattggtcggagagcactgtccctcattggtgttgagcaagtggtc
atgaaacatactagatttaacagtggtggtgcacatcaaggagagacatctgcacctcta
tcaaactttggaatggcacgctcttcttcctggtttgatatgaattctggaaacttctca
atggcatttaggacccctcctgttagcccccctcagcatgattatcttacaggattacgc
cgagtgtgttctatggagttcagaccacatcttatgaattcacctgagggcttagctgat
ccccttttaagccctgctgcagctcccagtaatgctgaactaagtatacttccccaatca
gcaatttacaactggagttgtggtcacttctctaggccacttctaactggttctgatgac
aacgagggcacaaatgctagacgagaagagagagaacgaattgcactggattgcattgct
aaatgccagcgttcctcagcttgcaagatgactagccaaattgctagctgggatacgagg
tttgagttgggtacaaaagcagcattattgatgccattttctccgatcgtcgttgcagct
gatgaaaatgagcaaataagagtgtggaactatgacgatgcgctaccggtgaacactttt
gaaaaccataagttatctgacagagggctaactaagcttttgcttatcaatgagcttgat
gagagcttgcttttagctgcctcaagtgatggaaatgtccgtatatggaaaaattttact
caaaagggaggacagaaacttgtaactgctttctcatcagttcagggtcatcgagctgct
ggtcgcagtattgtgatcgattggcagcagcaatctggttatctgtacgcatctggtgac
atgtcttccatcctggtatgggatcttgacaaggaacaacttctcagcaccattcaatca
tctgctgatagcgccatttctgctctgtctgcatctcaggtccactctggtcattttgct
gctggttttgctgatgcttctgtcaggatatttgatgttcgcacccctgataggctcgtc
tatatggccaggccacatgccccaagaacagaaaaggttgtgggcatagggtttcagcct
gggtttgatccatacaagattgtaagtgcatctcaagctggggacattcaatttcttgat
gttagaagggcagctgaaccttacctcactatcgaggcacacaggggttcacttacagca
ttagctgttcatcggtatgccccagttgttgcaagtggctcagccaagcagatgattaaa
gtgttcagtcttgaaggagaacagttgacgataatacgctaccagccatcttttatgggc
caaagaataggcagtgtaaattgcctttcttttcacccatacaaatcactcttggccgct
ggtgctggtgataatgctcttgtgtctatctatgcggaggaaaattacaagtaa
DBGET
integrated database retrieval system
