Phragmites australis (common reed): 133904390
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Entry
133904390 CDS
T10575
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00061
Fatty acid biosynthesis
paua00071
Fatty acid degradation
paua01100
Metabolic pathways
paua01212
Fatty acid metabolism
paua04146
Peroxisome
Module
paua_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
133904390
00071 Fatty acid degradation
133904390
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133904390
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
paua01004
]
133904390
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paua04147
]
133904390
Enzymes [BR:
paua01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
133904390
Lipid biosynthesis proteins [BR:
paua01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
133904390
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of breast milk
133904390
Exosomal proteins of breast cancer cells
133904390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3572
TetR_C_28
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
133904390
NCBI-ProteinID:
XP_062201844
LinkDB
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Position
22:complement(2629117..2639417)
Genome browser
AA seq
714 aa
AA seq
DB search
MERGQPEQSPMDAAQRRLRAVSAHLQPPAPTGGCGLAANPTAGEYAHVQGYSVVLPEKLQ
TGKWDVYRSARSPLRLINRFPGNPDIGTLHDNFVHNVLWCSKLHRYAVETFRDCRYLGTR
ICTDGTVGEYKWMTYGEASTSRTAIGSGLIYHGILEGARIGLYFINRPEWIIVDHACAAY
SYVSVPLYDTLGPDAVQFIVNHATVEVIFCVPQTLSTLLSFIAQMPCVRLIVVVGGDDAK
MPSAPTTTGVQIISYTKLHNQGKVSPQPFRSPKPEDVATICYTSGTTGTPKGAVLSHENL
IANVAGSSLGIKFYPTDVYISYLPLAHIYERSNQIALLHCGVAIGFYQGDNLKLMDDLAA
LRPTVFASVPRLYNRIYAAITNAVKESGGLKERLFRTAYSAKRQAIINGQNPSPMWDKLV
FNKIKARLGGRVRLMSSGASPLSADVMEFLRICFGGEILEGYGMTETSCVISTMDIGDKL
IGHVGSPNPSCEVKLVDVPEMNYTSEDKPYPRGEICVRGPTIFHGYYKDEIQTREVIDQD
GWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCFIYGDSL
NSALVAIVAVEPELLKAWAASEGIQYEDLRQLCADPRARAAVLADMDSIGKEAQLRGFEF
AKAVTLAAEPFTLENGLLTPTFKVKRPQAKAYFAKEISDMYAQLRETESARQKL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggggacagccagagcaatccccaatggacgccgcccagcgacggctccgcgcg
gtctccgcccacctccagccgccggcgcccaccggaggctgcggcctcgctgccaatccc
accgccggggagtacgctcatgtgcagggctacagtgttgttctcccagagaagttgcaa
actggaaagtgggatgtgtaccgatctgcacgatcacctctaaggttaataaacagattt
cctggtaacccagacatcggaacgctgcatgataattttgtgcacaatgttctatggtgt
tccaaattgcacaggtatgcagttgagacttttagagattgtagatacctgggtacaaga
atctgcacagatggaacagttggagagtacaaatggatgacatatggagaagctagtacg
agcaggactgcaataggttctggtcttatttatcatggaatacttgaaggtgcacgcatt
ggtctgtattttataaacagacctgaatggatcatagtggaccatgcttgtgctgcatat
tcatatgtatctgtgccactttatgacactcttggtccagatgcagttcaattcattgtg
aaccatgcaacagtagaagttatattctgtgtgcctcaaacactaagcactctgttaagt
ttcatagcccaaatgccatgtgttcggcttatagtggtagttggtggagatgatgcaaag
atgccatctgcacccacaactactggagtgcaaattatatcttacaccaagctgcacaat
cagggaaaggtgagtcctcaaccttttcgatctccaaaacctgaagatgttgcaactatc
tgctacaccagtggcactactggcactcccaagggagctgttctttctcatgagaactta
atcgcaaatgtagcaggatcaagccttggaattaaattttaccccactgatgtgtatatc
tcatatctacctttggctcacatctacgagagatctaaccagattgcattgcttcactgt
ggtgttgccattggattctaccaaggggataatttgaagctgatggatgatctggctgct
ttgagaccaacagtattcgcaagtgttccccggttatataacagaatttatgccgcaatt
acaaatgctgttaaggagtctggtgggctgaaagaaagattgttccgtactgcatacagt
gccaagaggcaagcaattattaatgggcaaaatccatccccaatgtgggacaagttggta
ttcaacaaaataaaagctaggcttggtggacgagtgagactcatgagttcaggtgcttct
ccattgtcagcagatgtcatggaattcttgagaatatgttttggcggcgaaattcttgaa
ggctatggaatgacagagacatcttgtgtcatctctacaatggatattggtgataagtta
attggtcatgtcggatccccaaatccttcttgcgaggttaaacttgtggatgtcccagaa
atgaattatacttctgaggataaaccatatcctcgtggagaaatttgtgtcaggggacct
acaattttccatggttattataaagatgaaatccaaacaagagaggtcattgatcaagat
ggctggttgcacactggagacataggtttgtggctgcctggagggcgtctaaaaattata
gataggaaaaagaacattttcaagttagctcaaggagaatacatagctccagaaaagatt
gaaaatgtctatgctaagtgcaagttcattgcccaatgttttatatatggtgatagttta
aactctgccctagtagccattgttgcagttgaaccagagctgctgaaggcttgggctgca
tctgaaggaatccagtacgaggatttaagacagctctgtgctgatcctagagcaagagca
gctgtcctggctgacatggattctatcggaaaggaagcacagctaagaggttttgaattt
gctaaagctgttactcttgctgccgagcctttcacattggaaaatggtctcctcacccca
acattcaaggttaaaagaccgcaagctaaggcatactttgcaaaagaaatctcagatatg
tatgcacagctgcgagagacagagtcagcgaggcagaagttgtaa
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