Phragmites australis (common reed): 133904413
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Entry
133904413 CDS
T10575
Name
(RefSeq) ABC transporter G family member 41-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
paua Phragmites australis (common reed)
Pathway
paua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133904413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paua02000
]
133904413
Transporters [BR:
paua02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
133904413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA
AAA_25
AAA_18
AAA_16
SMC_N
AAA_22
RsgA_GTPase
AAA_29
AAA_23
ABC2_membrane_3
AAA_30
AAA_33
AAA_28
AAA_17
Rad17
T2SSE
RuvB_N
TsaE
ABC_trans_N
nSTAND3
AAA_14
PduV-EutP
AAA_19
AAA_5
NACHT
Viral_helicase1
RNA_helicase
NPHP3_N
AAA_11
AAA_15
ATPase_2
NTPase_1
Spore_III_AA
AAA_7
Mg_chelatase
DUF815
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
133904413
NCBI-ProteinID:
XP_062201900
LinkDB
All DBs
Position
22:complement(99370..109578)
Genome browser
AA seq
1461 aa
AA seq
DB search
MDRDDHLGHQEAQEDHKPETGGRRSLSLEINTLASFRESLSRSLSLSDNQHEDEVELKWA
AIERLPTSDRLHTSLLHARLRLGLLGGDHGEAAPLEVVDVRRLGAAERRVVVDTLIANIH
RDNLRLLRKQRQRMDRVGVRPATVEVRWRDVCVEVECQVVQGKPLPTIWNAVVSNLQVVS
SMLGFNRQQARIRILDNVSGIVKPSRLTLLLGPPGCGKTTLLKALAGKLNTNLKVTGEIE
YNGVKLNEFVPEKTAAYISQYDLHVPEMTVRETLDFSARFQGVGNRAEIIKEVIRREKEA
GITPEPDIDTYMKAISVEGLERSMQTDYIMKIMGLDICADIMVGDAMRRGISGGEKKRLT
TGEMIVGPSKALFMDEISTGLDSSTTFQIVSCLQQLAHISESTILVSLLQPAPETYELFD
DIILMAEGKIVYHGSKSCIMSFFESCGFKCPERKGAADFLQEVLSKKDQQQYWSRSGGTY
SFVTVDQFCDKLKASQVGRNLAEELSKPYDKSNGHNKALSFSIYSLSKWELLKACFAREL
LLMKRNAFIYITKAVQLGLLAIITGTVFLRTHMGVDRVHANYFMGSLFYALLLLMVNGFP
ELAMAISRLPVFYKQRDYYFYPAWAYAIPAFILKVPISLVESIAWTSISYFLIGYTPEAS
RFFRHLLILFLIHTGSLSMFRCVASYCQTMVAGSVGGTMAFLVILLFGGFIIPRPSMPNW
LKWGFWLSPLSYAEIGLTGNEFLAPRWLKFTISGMTLGRRILMDRGLDFSSYFYWISIGA
LTGFIFLFNIGFSIGLTIKKPPGTSRAIISRNNLTTFNGRDQDMSKDMENGMHMSQAEAS
LTPNRIGRMVLPFTPLTISFQDVNYYVDTPAEMREQGYMERKLQLLHNITGAFQPGVLSA
LMGVTGAGKTTLLDVLAGRKTGGVIEGDIRIGGYPKIQQTFARISGYCEQTDVHSPQITV
GESVAYSAWLRLPTEIDSKTRNEFVNQVLETIELDEIKDALVGIPGVNGLSTEQRKRLTI
AVELVSNPSIIFMDEPTSGLDARAAAIVMRAVKNVSDTGRTVVCTIHQPSIEIFEAFDEL
MLLKRGGELIYGGPLGYHSCKVIEYFQAIPGVPKIKVNYNPSTWMLEATSTSIEVQLGCN
FTQIYKESSMCKDMDALVKRLSTPPLGTSDLHFPTRHPQKFWEQFKACLWKQCLSYWRTP
SYNLVRIVFITVACIAYGALFWQRGDINRINNQQGMFTILGCMYGTTLFAGINNCQSVMP
FVSIERSVVYRERFAGMYSPWAYSFAQVAMEIPYVFVQIVLFMFIAYPMIGYAWTAAKFF
WFMYTMLCTLLYFLYLGMMMVSLTPNIQVASILASMFYTIQNLMSGFIVPIPQIPKWWLW
LYYISPMSWTLNVFFTTQFGYEDDKKIEVFGETKSVAEFVRDYFGFRRELLPLAAVVLAA
FPILFATLFGYSISKLNFQRR
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggatcgggacgaccacctgggtcatcaagaagcacaagaagatcataagccggagacg
ggcggccggagatcactgtcgctggagatcaacactttggccagcttcagggagagcctg
tcgcgctccctctccctctccgacaatcagcatgaggatgaggttgagctgaaatgggcc
gccatcgagaggctgcccacctccgacaggctccacacctcgctgctccacgctcgccta
cgccttggccttcttggtggagaccatggagaggcggcgccgttggaggtggtggacgtg
cggaggctgggggcggcggagcggcgggtggtggtggacaccctcatcgccaacatccac
cgcgacaacctccgcctgctccggaagcagcggcagaggatggacagggtgggcgtccgg
ccggcgacggtggaggtgcggtggcgcgacgtgtgcgtggaggtggaatgccaggtggtg
caggggaagccgctccccaccatctggaacgccgtcgtctccaacctccaggtggtgagc
agcatgctgggcttcaaccggcagcaagcgaggatccgcatcctcgacaatgtcagcggc
atcgtcaagccttcgaggctaacacttctcctgggacccccaggctgcggcaaaaccacc
ctcctcaaggcactcgcaggcaagctcaacaccaatctcaaggtaacaggagaaatcgag
tacaatggcgtgaagctgaatgagtttgttccggagaagacggcagcctacatcagtcaa
tatgacctccatgtccctgagatgactgtcagagagaccctcgacttctctgcaagattc
cagggtgttggcaacagagcagaaatcatcaaggaggtgatcagaagggagaaggaggcc
gggattacccctgagcctgatatcgacacgtatatgaaggcgatatctgtggaaggttta
gaaaggagcatgcaaacagactacattatgaagatcatgggacttgacatatgcgccgac
ataatggtgggagatgcaatgagaagaggtatttcaggcggtgagaagaagagactaacc
acaggagagatgatagtaggaccctcaaaagctctcttcatggatgaaatatcaactggg
ttggatagctccaccacattccagattgtttcttgcctccagcagttggctcatatctca
gagtctaccatactagtctcactccttcaaccagcaccagagacttatgagctttttgat
gatattatcttgatggctgaaggaaaaattgtataccatgggtctaagagttgcattatg
agtttctttgaatcatgtggattcaagtgcccggagaggaaaggagccgctgactttctt
caagaggtattgtcaaaaaaagatcaacaacaatattggagccgtagtggaggaacatac
agttttgttactgttgaccaattctgtgataagttaaaagcatctcaagttggtcggaat
cttgctgaggagctttcaaagccttatgacaaatcgaatggccataataaggccttgtcc
ttcagtatctactcgttatccaagtgggaactcctcaaggcatgtttcgcaagagagctt
ctcctcatgaaacggaatgccttcatctacataacaaaagctgttcaacttggactactt
gccattattactggaacggtatttctccgcacacatatgggtgttgatagagttcatgct
aactatttcatgggttcactgttctatgcactacttctgctgatggtgaatggattccct
gagctggccatggcaatcagcagactcccagtcttttacaaacaaagagactactatttc
tatcctgcatgggcttatgcaataccagcttttatcctaaaggttccaatctctttagtt
gagtcaatagcttggacatcaatatcttacttcctcattggctatactccggaagcatcc
agattcttccgtcatctcctcatcctcttcctaatccacaccggatcattatcaatgttt
cgatgtgttgcctcgtactgccaaacaatggtggctggttcagtgggtggtacaatggca
tttctagtcatccttctatttgggggtttcatcattcctcggccatccatgcctaattgg
ctgaaatggggattttggctctctccattgtcctatgctgagatcggcttaactggaaat
gagttcttggcaccaagatggctgaagttcacaatttctggtatgacacttggaaggagg
atattaatggacagagggctagacttctccagctacttctactggatttcaattggagca
ttgactggatttatttttttgttcaatataggtttttccatcggcttgactattaaaaag
cctccaggaacttctagagctattatctctcgtaataatcttaccacatttaatggaaga
gaccaagatatgtccaaggacatggagaatgggatgcatatgtcacaagcagaagcttct
ttgactcctaacagaattgggaggatggtactacctttcacgcccctaacaatatcattt
caggatgtgaattattatgtggacacacctgcggaaatgagggagcaaggttatatggag
agaaaactacaactactccacaacatcacaggagctttccagccaggggtcctctcagca
ctcatgggggttactggagcagggaaaacaaccctgcttgatgttcttgctgggaggaaa
actggcggtgttattgaaggagatataagaataggaggttatcctaaaattcaacaaact
tttgctaggatatcaggctactgtgaacaaactgatgttcactccccacagatcacagtg
ggtgagtctgttgcatattcagcttggttgcgccttccaacagaaattgactccaaaacg
agaaatgaatttgtcaatcaagttcttgaaacaattgagttggacgaaataaaagatgct
ttggttggaataccaggggtaaatgggctatccacggaacaacggaaacggctcacaatt
gcagttgagcttgtatccaacccttcaatcatattcatggatgagccaacatcaggattg
gatgcaagagcagctgctattgtcatgcgtgcagtaaagaatgtttcggatacaggtcga
acagttgtgtgcaccattcaccaaccaagtatcgaaatatttgaagcatttgacgagttg
atgctactgaaaaggggtggagagttgatctatggtgggccgcttggttaccattcatgc
aaggtcattgaatatttccaggcaatacctggggtacccaagatcaaggtcaactataac
ccatcaacatggatgctagaagctacttctacatctatagaagttcaattgggatgcaat
ttcacacaaatttacaaggaatcatcaatgtgcaaggatatggacgcacttgtaaagcgc
ttgagcacgccacctctgggtacaagcgatctccatttcccaacaaggcatccgcagaag
ttttgggagcagttcaaagcttgcctctggaagcaatgtttatcatactggagaacccct
tcctacaacctggtgcgaattgtgttcataacagttgcctgcattgcttatggggcatta
ttctggcagcgaggcgacataaaccgcataaataaccagcaaggtatgttcaccatactg
ggatgcatgtatggcaccactctgtttgctggcatcaacaactgccagtcggtgatgcca
ttcgtttccatcgagcgctctgtcgtgtacagagaaaggtttgctggaatgtactctcct
tgggcctactcctttgcacaggttgcaatggagattccttatgtatttgtgcagatagtg
ttgttcatgttcatagcatacccgatgattgggtacgcgtggacagcagcaaagtttttt
tggttcatgtataccatgctctgcacattgctctacttcctctaccttggaatgatgatg
gtatcactcaccccaaacatccaagtggcgtccatattggcatccatgttctacaccata
caaaacctcatgtccggcttcattgttcctattccacaaataccgaaatggtggctatgg
ctgtactacatctccccaatgtcgtggacacttaacgtcttcttcacaacccaatttggg
tatgaggacgacaagaagattgaggttttcggagagaccaaatccgtggctgagtttgtg
agagactactttggttttcgccgtgagctgctaccactagcagctgtagttctggccgcc
ttccccatcctctttgccaccctcttcggctacagcatttcaaagctcaacttccaaagg
cgataa
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integrated database retrieval system
