KEGG   Phragmites australis (common reed): 133904424
Entry
133904424         CDS       T10575                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133904424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:paua03041]
    133904424
   03400 DNA repair and recombination proteins [BR:paua03400]
    133904424
Spliceosome [BR:paua03041]
 Complex B
  Other components
   Prp19 complex
    133904424
 Complex C
   Prp19-CDC5 complex
    133904424
DNA repair and recombination proteins [BR:paua03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    133904424
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect C45G9_C
Other DBs
NCBI-GeneID: 133904424
NCBI-ProteinID: XP_062201914
LinkDB
Position
22:16177477..16195584
AA seq 984 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEANDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDTRHRKRKRKGIDYNAEIPFEKRPPPGFYDTVGEDRPLEHVQFPT
TIEELEGKRRADVEAQLRKQDIARNKIMQRQDAPAAIMQANKLNDPEAVTKRSKLMLPPP
QISDHELEEIAKMGNAGDPALAEELGEGSAATRTLLASYSQTPRLGMTPLRTPQRTPAGK
GDAIMMEAENLARLRESQTPLLGGDNPDLHPSDFSGVTPRKKEIQTPNPMATPLASPGPG
VTPRIGMTPSRDGHSFGVTPKGTPYRDELRINEEVEMQDSAKLELRRQAELRRSLRSGFT
SIPQPKNEYQIVMPPITEDEKEEAEEKIEEDMSDRLARERAEEQVRQEALLRKRSKVLQR
SLPRPPALSVDILRQSLIRSGESRSRSTFVPPTSLEQADELINEELLRLLEHDNAKYPLD
EKTQKEKKKGSKRKQNGEALVPEIEDFDEDELKEANSMVEQEIQYIRVAMGHENESFEDF
VKAHDACQEDLMFFPTNNSYGLASVAGNVDKISALQNEFEVVKKRMDDEAKKASRLEQKI
KLLTQGHQARAGKLWSQVQDTFKQMDTAATELECFQELQKQEHMAASYRVRNLTEEVNEQ
KALERTLQSHYGDLLSGYQGIQEQLEECKRQLKVQEAIEAENRAREEEVAAHNRAAEEEN
ERKNHDVEEEAEQMNRATDEGAAGSKETDENHMDVDGSVDGEFVGPIPPAPDNEGYNNEA
SPQQITSNLQTGDTATTEDGTRDKIDACKSEDQDKTDGSIAVDAGGQADGKNELPTVATS
INDGNTTASSDQAVSTEENGTVPE
NT seq 2955 nt   +upstreamnt  +downstreamnt
atgaggatcatgatcaagggtggcgtgtggaagaacacggaggacgagatcctcaaggcg
gccgtgatgaagtacggcaagaaccagtgggcgcgcatctcctccctgctcgtccgcaag
tccgccaagcagtgcaaggcgcgctggtacgagtggctcgacccatccatcaagaagact
gagtggacaagggaagaggatgagaagctactgcatcttgctaaactcatgcctactcag
tggaggacaattgcacctattgtaggtcgaacaccatctcagtgccttgaacgctatgaa
aagctgctagatgctgcatgtgcgaaggatgaaaattatgaggctaatgatgaccctagg
aagctgcgacctggtgagattgatccaaacccagagtcaaaacctgcacgtcctgatcct
gttgatatggatgaagatgaaaaggaaatgctttctgaggcaagggctcgcttagctaac
actaggggtaaaaaagcaaaacggaaggcaagagagaaacaacttgaagaggccaggcgg
cttgcctcactacaaaaaaggagagaattgaaggcggccggtattgatacacggcacagg
aaaagaaagagaaaggggattgactacaatgcagagatccctttcgaaaagagaccacct
ccaggtttttatgatacggttggcgaagacaggccacttgagcatgtacagtttccaaca
accattgaggagcttgaagggaagagaagagcagatgtagaggcacaattaagaaagcaa
gacattgccaggaacaagattatgcagagacaggatgcccctgcagctataatgcaagcg
aataaactcaatgacccagaagctgtcacaaaaagatccaaactaatgcttccgcctccc
caaatttctgatcatgaattggaggagatagcaaagatgggtaatgctggtgatcctgct
ttagctgaggagcttggcgaaggaagtgccgccacaagaactttgcttgccagctattct
cagactccaaggcttggtatgacaccattgcgaactccgcaacgaactccagctgggaag
ggtgatgctattatgatggaggcagaaaatcttgcacgtctgagagaatcacaaacacct
cttttaggaggggacaacccagatcttcatccatcagatttctccggtgttacaccacgt
aagaaggagatacaaactccaaaccccatggcaacacctttggcaagccctggacctggt
gttaccccaagaattggtatgacaccctccagagatggacatagctttggagtaactccg
aaaggaactccttatcgagatgagcttcgcataaatgaagaggtggaaatgcaggacagc
gctaaacttgagcttcgtaggcaagctgaactgagaagaagcctgcgatctggttttact
tctattccacagccaaaaaatgagtaccagatagtcatgccacctattacagaggatgag
aaggaagaagctgaagagaaaattgaagaggacatgtcagacaggctggcacgagaaagg
gcggaggaacaagttaggcaggaggcgttgctcagaaagagatccaaagtgttgcagaga
agtctgcctaggccacctgccctttcagtagatatcctccggcaatctcttattagaagt
ggagaaagccgaagcagaagcacctttgtgcctcctacatcacttgaacaagctgatgaa
ctaataaatgaggagctccttaggcttcttgagcacgataatgcaaagtatcctctcgat
gaaaaaactcaaaaagagaaaaagaaagggagcaagcgtaagcaaaatggggaagctctt
gtccctgaaattgaagattttgatgaagatgaactaaaagaggctaattctatggttgaa
caggagattcaatatattcgagtggccatgggacatgaaaatgaatcttttgaggacttt
gtaaaagcacacgatgcatgccaagaggaccttatgttttttcctactaacaacagctat
ggtttagccagtgttgctggaaatgttgataagatttctgctttgcaaaatgagtttgaa
gttgtaaagaagcgaatggatgatgaagctaaaaaggcttctcggcttgagcagaagatt
aagcttctgacacaaggacatcaggcacgggctggaaaactgtggtcacaggtccaagat
acattcaagcagatggacactgcagcaacagaacttgaatgcttccaagagctgcagaaa
caggaacatatggctgcttcctatagagttcgaaatttgactgaagaagtaaatgaacag
aaagcattagaacggactctccagagccattatggtgatctgttatctggttaccagggg
attcaagaacagctcgaggagtgcaagaggcagctcaaggtacaggaagcgatagaagca
gaaaatcgtgctcgggaagaggaagtggcagcacataatcgtgctgcggaggaagagaat
gaaaggaaaaatcatgatgttgaagaggaagcagaacagatgaatagggctactgatgaa
ggggctgcaggaagcaaagaaaccgatgaaaatcacatggatgtggatgggagtgtagat
ggggaattcgtaggtcctattcctccagcaccagacaatgaagggtataataatgaggct
tcacctcagcagattacttcaaaccttcaaactggtgacaccgctaccacagaagatggc
actcgtgacaagattgatgcgtgcaaatcagaagatcaggataaaaccgatggcagcatt
gctgttgatgctggtggtcaggcagatggcaagaatgaacttccaactgttgctaccagt
ataaatgacggaaatactaccgcatcttcagatcaagctgtctcgactgaggagaatggt
acggttcctgaatga

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