Phragmites australis (common reed): 133904587
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Entry
133904587 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133904587
KO
K08066
nuclear transcription factor Y, gamma
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133904587
Transcription factors [BR:
paua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
133904587
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GFIT
Motif
Pfam:
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
133904587
NCBI-ProteinID:
XP_062202052
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Position
22:complement(20323726..20325315)
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AA seq
502 aa
AA seq
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MDCPIDIRTSPRTPMPASEQQMIEEFWRTKQEEIEAIEDFGERAIPMTRLKKVICAEKGK
MMMTFDTPSFLTKACEMFVQELTFCAWMCASSHHRGIILDSDIAEAIASMESYDFLNDLL
HAYQNDQNSVPRPKPTKKRHKSTDQPSTSCHPHLHQFQVPQFQVPQFQVPQFQTPQFHVP
QFSPQFVGYPPYVRIPLLVPPTNFHRMPLPLPFLPQETPPLMATTVRPTPIVGGIIPPIN
HMARGLGFFGNNINTTTNNNTPSNFAMSNNVAASCVMAPPLQACAGAIPNVPNTYCFMNL
TSTSATAAVYGAGGASASNLAAQDGGVPFHFPYNPPVALQFPSLPEMANSSTGPTASTGN
TIHASGAADADADADADANHDVTVGVDDGPQQHQENETTADNCLNAADGSLDAVVAAANS
PAENNLDIDWDDFHMPDDSLLSQFWEDIMMDEDPVLLPNATSTENLPLTGDIQDLEGFGH
EPYLLDNIVSVASTSSRRSEMN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggattgtcctattgacatccgcacatcgccaaggacgcccatgccagcgtctgagcag
cagatgatagaggagttttggaggacgaaacaagaagagattgaagcaattgaggacttc
ggtgagcgtgcaattcccatgacccgtctcaagaaggtcatttgtgctgaaaaaggtaaa
atgatgatgacatttgacacgccttccttcctgacaaaggcgtgtgagatgtttgtgcaa
gaacttacgttctgtgcttggatgtgtgcaagttcccaccatcgtggtatcatactagac
tctgacattgctgaggcaattgcctccatggagtcctatgatttcctaaatgatcttcta
catgcttatcagaatgatcaaaactctgttcctaggcccaagcctactaagaagcgtcat
aagtccacagatcagccatccacctcctgccatccacatctccatcagttccaggtgcca
caattccaggttccacaattccaagtgccacagttccaaacgccacagttccatgtgcca
caatttagtcctcaatttgttggatatcctccctatgttcgtattcctcttttagtgcca
ccaacaaattttcatcgcatgccattaccccttccatttctaccacaagaaacgccaccc
ttgatggcaaccacggtcagacccacacctattgtgggtggaataataccgcctatcaac
cacatggcaaggggtttggggttctttggaaacaacatcaacaccaccacgaacaataat
accccaagcaattttgctatgagtaataacgttgctgcttcatgtgtgatggctcctcct
ctgcaagcatgtgcaggagctatacctaatgtcccaaacacttactgtttcatgaacctg
accagtacttctgctactgctgctgtctatggtgctggtggtgctagtgctagtaatctt
gctgctcaagatggaggtgtgccattccatttcccttataaccctccagtggctttgcaa
ttcccatcccttccagaaatggctaatagtagcaccggccctaccgcctctactggtaac
accatacatgctagcggtgcggcagatgccgatgccgatgccgatgctgatgccaatcat
gatgttactgtcggtgttgatgatggtccgcagcaacaccaggagaacgaaactactgct
gacaattgtctaaatgctgcggatggaagcttggatgcagtagttgctgccgctaacagc
ccagccgagaataacttggatatcgattgggatgattttcatatgcccgatgactctttg
ctatcccagttttgggaggacattatgatggacgaagacccggtgcttctgcctaatgct
acctctactgagaaccttccacttactggcgacatacaggatctcgagggattcggccat
gaaccgtatctccttgacaacatcgtctccgtcgcaagcaccagcagcagacgcagtgag
atgaactga
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