Phragmites australis (common reed): 133904757
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Entry
133904757 CDS
T10575
Name
(RefSeq) probable catabolite repression protein creC
KO
K24741
WD repeat-containing protein 20
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
paua04990
]
133904757
Domain-containing proteins not elsewhere classified [BR:
paua04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
133904757
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_Nup120_160
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Cytochrom_D1
Beta-prop_SPT8
Beta-prop_Vps41
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
133904757
NCBI-ProteinID:
XP_062202269
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Position
22:4961394..4967696
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AA seq
556 aa
AA seq
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MAGAPPAAPGPGGGAAAGLKTYFKTPEGRYKLQYEKTHSALLHYSHGGKTVSQLTVACLK
AKPTEQGSTPSTPSSSSGMRSAAARLLGTGNGSRALSFAGGNGVSRAVSGSSRIGGGLGT
SIGLGGSQGVANYDGKGSYIIFNAADTLFISDLNSHDKDPIKSIHFSNSNPLCHAFDPEA
KEGHDLIIGMGSGDVYSMSLRQQLQDPGRKPVAAQHYNKGDKDVTPNGSRCTSVAWVPER
EGIFAVSHSDGNLYVYDKNKDGSTDCMFPALKDQSQFTVSHAKSSKSNPIARWHISQGSI
NAISFSPDGVYLATVGRDGYLRVFDFLKEQLIFGGRSYYGALLCCTWSSDGKYLLTGGED
DLVQVWSMDDRKIVAWGEGHNSWVSGVAFDSYWSPPNSDGTGENVYRFGSVGQDTQLLLW
DLALDEIVVPLRHPSSGSPTFSSGSPSAHWDNACLPIGVLQPSPRMRDVPKLSPLVSHRV
HADPLSGLVFTNESILTICREGLIKIWVRSDQSENNQQSNSSEFVLGTAVSRDRATTSLN
KASGSSFKKPSSVLIT
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgctccgccagcggcgcctgggccggggggcggcgccgcggcggggctgaag
acctacttcaagacgcccgaggggaggtacaagctgcagtacgagaagacgcactccgcc
ttgctgcactacagccacggcgggaagaccgtctcgcagttgacagtggcgtgcctgaag
gcgaagcctactgaacagggctccacgccgtcaacaccaagctccagcagtgggatgcga
tctgcagcagcaaggctgctgggcactgggaatggtagcagggcacttagctttgctggg
ggcaatggagtaagccgggctgtttctggaagcagccgtataggaggtggccttggtaca
tctataggccttggtggatctcaaggggtggcaaattatgatggcaagggttcatacatc
atcttcaatgctgctgatacactattcatcagtgacctcaattcccatgataaggatcca
ataaagtccatccatttcagcaactcaaacccattatgccacgcatttgacccagaagcc
aaagaggggcatgacctgatcattgggatgggatcaggggatgtctattcaatgtcactg
aggcaacagttacaagatcctgggaggaagcctgttgcagcccaacattacaataagggt
gataaagatgtaacacccaatggcagccggtgcacatctgttgcatgggtgcctgagcgt
gaaggcatttttgctgttagccattctgatggaaatctgtatgtgtatgataaaaacaag
gatgggagcacagattgtatgtttccagctttgaaggatcaatcccagttcacggtttct
catgcaaagtcaagtaagagcaacccaattgccagatggcatatatctcaaggttcgatc
aatgccatttccttttcaccagatggcgtgtacttggcgactgttgggagagatggttat
ttgagagtttttgattttttaaaggaacaactaatatttggggggagaagttattatggt
gctctgctttgttgcacgtggagctcggatggcaaatatctattaacaggtggtgaagat
gatcttgtgcaggtatggagcatggatgatagaaagatagttgcatggggcgaagggcat
aattcctgggttagtggagttgcttttgattcatattggtccccaccgaattctgatgga
acaggagaaaatgtctatcgctttggttctgttggtcaggacacccaactgcttctgtgg
gaccttgcactggatgagattgttgtcccgctacgtcatccttcaagtggctcgccgaca
tttagcagtggaagcccttctgcacattgggacaacgcatgccttccaataggtgttctt
caaccttctccaaggatgcgagatgtgccgaagctctcaccccttgtttcccaccgagta
catgccgatcccctctctggtctggtgttcaccaatgaatcgattctcaccatctgccgc
gagggcctcataaaaatctgggtcagatcagaccagagtgaaaataatcaacaatcaaat
tcttcagaatttgttttaggcactgctgtttcaagggatagggcgaccacatctttgaat
aaagcaagtggctccagcttcaagaaaccgtcgtctgttcttatcacatga
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