Phragmites australis (common reed): 133904789
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Entry
133904789 CDS
T10575
Name
(RefSeq) la-related protein 6B-like
KO
K15191
La-related protein 7
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133904789
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
133904789
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
RRM_1
PAM2
U_exon
HENMT1_C
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
133904789
NCBI-ProteinID:
XP_062202325
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All DBs
Position
22:complement(7030916..7045447)
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AA seq
473 aa
AA seq
DB search
MPHIDGADQIAAEWFATEAAERPGELRRSGSASRLNAQAPEFVPRGPPPPAAAVVPPPPP
LIRVFAAPPPPPRAAFFAAPPPRPPPFEYYAPVGGRGGFATEEQEPEPEPKVELLPPAEK
ADPVVDGLADEVVHKITKQVEYYFSDINLATTEHLMRFITKDPEGYVPISVIAGFKKIKA
LVHNNSMLAAALRTSSKLAVSDDGKRVKRQEPFTESDLQELQSRIVVAENLPGDPCYQNL
KKIFSAVGSVISIRTCYPQTPNGTGPATNRSAKLDMLFSNKLHAFVEYEIPEDAEKAILE
LNDEKNWRNGLRVRLLNTCTTKGGGKGKKGVHEADGNGEEDVSTSNQSNEKQFEESSQLL
DVLPEHLFEENFNDKEVPKHGKGRGRGGRGRGRGNHQYNNQHYNHHGSNRGGAHPVGTPP
HNLIIKPEQHQQLPIGANKQPPGPRMPDGTRGFAMGRGKPQAMLPGLCAVGEP
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatatagacggagctgatcagatcgccgccgagtggttcgcgacagaggcggcg
gagcggccgggggagctgcggaggagcggctccgccagccgcctcaacgcgcaggcgccg
gagttcgtgccgcgtgggccgccgccgccggcagctgcggtggtgccgccaccgccgcct
cttattcgcgtgttcgccgcgcctccccctcctccgcgcgcggcctttttcgcggcgccc
ccgccccggccaccgccgttcgagtactacgcgccggtggggggacgcggtggatttgcc
accgaggagcaggaaccggagccggagccgaaggtggagctgctcccgcccgcggagaag
gcggatccggtggtggacggactcgccgacgaggtggtgcacaagatcaccaagcaggtg
gagtactatttcagtgatataaacctggctaccacagaacatttgatgagattcattacc
aaggatcctgagggatatgtgccaatatcagttattgctggtttcaagaaaataaaagct
ttggtgcataataactcgatgcttgctgcggctctccgaacctcttcgaaacttgctgta
agtgatgatggaaaaagagtcaaacgccaggagccatttactgaatctgatttgcaggag
ctccagtcccgaattgttgttgcagaaaatcttcctggtgatccttgctaccagaatctt
aagaagatattttcagctgttggcagtgtgatttcaatccgtacttgctatcctcagact
ccaaatggcactggccctgctactaatagatctgccaagctagatatgcttttttctaac
aagctgcatgctttcgtggagtacgagattcctgaggatgctgagaaggcaattttggag
cttaatgatgagaaaaactggagaaatgggcttagagtccggttgctgaatacttgcacg
acgaaggggggaggcaaaggcaaaaagggagtgcatgaagctgatggaaatggcgaggag
gatgtctccacttcgaaccaatcaaatgagaagcagtttgaagaatcctctcaactgtta
gatgtattgccggaacacttgtttgaggagaacttcaatgacaaggaagttccgaaacac
ggcaaaggacgcggacgtggtggcagaggacgcgggcgtggcaatcaccagtacaacaac
cagcactacaatcaccacggcagcaaccgcggtggtgctcatccggttggaactccgcca
cataacctgataatcaaacccgagcagcaccagcagctgccaatcggggccaacaaacag
cctccaggccctcgcatgcctgacggcacacggggttttgccatgggcagagggaagccg
caagctatgctaccaggtttgtgcgctgttggcgagccttaa
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