Phragmites australis (common reed): 133904820
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Entry
133904820 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133904820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133904820
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133904820
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
133904820
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
133904820
NCBI-ProteinID:
XP_062202379
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Position
22:14333347..14343848
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AA seq
332 aa
AA seq
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MAKFSFDDAEEDPPAAASGGDKRKREDGPPGGAPPKARNLAVGGGEPDGSATVGEERAEG
SGRKVVETGGGEADEGISVRIDPDVLDCSICFEPLRPPLYQCQNGHVACFSCWSRLSNKC
HICSHDANFARNIALEKIVESVKSSCSYANWGCSKLVSYSLRDAHEESCLFAPSVCPIPG
CGYRGFTGWWSGHFFIDHNAEGLRFMYGQHFEVNLEMSVPFLVLLAEDDHLFLVLNKNVM
PFGHAFSVVCLRTGNLNWNFLYEIKAISSANTENSLQLKASVTNTREWGGLHPTEAFLLV
PYVFCKSSKLTLNLSIERFADVGGGYVTSSVL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttctctttcgacgacgccgaggaggaccctcccgccgctgcttccggaggc
gacaagagaaagcgcgaagacggccctcccggcggagcccccccgaaggcccggaatttg
gcggtcgggggcggcgagccagatggaagcgcaacagtaggggaggagagggccgagggg
agcggccggaaggtggtggagaccggcggtggggaggctgatgagggcatcagcgtgcgg
atcgacccggacgtgctcgactgctccatctgcttcgagcctctccgaccgcccctctac
cagtgccaaaatggccatgtagcatgcttttcctgctggtccaggctgagcaataagtgt
cacatttgttctcatgatgccaactttgcacggaacattgcactggagaagattgttgag
tcagtcaagtcctcatgctcgtatgccaattggggttgtagcaagttggttagctattcg
ctcagagatgctcatgaagaatcttgcctttttgctccttcagtgtgtcctattcctggt
tgcgggtacagaggattcacaggatggtggtcaggacatttctttatagaccataatgct
gaaggcctgcggttcatgtatggtcagcacttcgaagtaaatctggaaatgtcagttcct
tttctagttcttctagcagaggatgaccacctattccttgtcctgaacaagaacgtgatg
ccctttgggcatgcattttcagtggtttgccttaggactggcaatctgaactggaatttc
ctctacgaaataaaagcaattagtagtgcaaacactgaaaacagcctacaactgaaggct
tctgttacaaacacaagggagtggggcggtcttcaccctacagaagctttccttttggtt
ccttatgtcttttgcaaatcgagcaaactaacactaaacctctctattgagaggtttgct
gatgttgggggtggatatgtgacgtcctctgtgttgtaa
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