Phragmites australis (common reed): 133905223
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Entry
133905223 CDS
T10575
Name
(RefSeq) protein SCARECROW-like
KO
K27742
protein SCARECROW
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133905223
Transcription factors [BR:
paua03000
]
Eukaryotic type
Other transcription factors
GRAS
133905223
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GFIT
Motif
Pfam:
GRAS
RraB
DUF3391
TPP_enzyme_M_2
Motif
Other DBs
NCBI-GeneID:
133905223
NCBI-ProteinID:
XP_062202942
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Position
22:1362809..1366579
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AA seq
647 aa
AA seq
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MGSSSLLFPSSSSAANASPSYSHSHAITSSSSHSLLPPVPSQDHLLLHYLQQLDHHQEPA
AAMVRKRPAPDMDLPPPRRHVTGDLSDVTAAAAGVPPSSASAQLPALPTQLPAFQQHAEM
DVTAPPAQAGEVAASTTAWVDGIIRDIIGSSGAAVSITQLIHNVREIIHPCNPGLASLLE
LRLRSLLTADPAPPPPPALLHNTAPAAPTVAALPPPPPLPDKRRHEPPCQEEPNPPPQSP
KVPTAEETAAAAAAAAAAAAKERKEEQRRKQRDEEGLHLLTLLLQCAESVNADNLDDAHQ
TLLEIAELATPFGTSTQRVAAYFAEAMSARLLSSCLGLYAPLPPASPAAVRVHGRVAAAF
QVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPR
VKLTGLGTSMEALEATGKRLSDFADTLGLPFEFCAVAEKAGNVDPEKLAVTRREAVAVHW
LHHSLYDVTGSDSNTLWLIQRLAPKVVTMVEQDLSHSGSFLARFVDAIHYYSALFDSLDA
SYGEDSAERHVVEQQLLSREISNVLAVGGPARTGDVKFGSWREKLAQSGFRAASLAGSAA
AQASLLLGMFPSDGYTLVEENGALKLGWKDLCLLTASAWRPIQTSGR
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctcctccctcctcttcccctcgtcgtcctccgccgccaacgcctctccctca
tattctcattctcatgccatcacctcctcctcctcccattccttattgccaccggtcccc
tcccaagaccacctcctcctccactacctgcaacagctagaccaccaccaagaacccgcc
gccgccatggtccgcaagcgccccgcccccgacatggacctcccgccgccgcgccgccac
gtcacgggcgacctctccgacgtcaccgccgctgccgctggggtgccgccgtcgtccgcc
agcgcgcagctcccggcgctgcccacccagctccccgcgttccagcagcacgcggagatg
gacgtcaccgcgccccccgcgcaggcgggcgaggtggcggcgtcgacgacggcgtgggta
gacggcatcattcgggacatcattgggagcagcggcgcagcggtgtccatcacgcagctt
atccacaacgtccgcgagattatccacccctgcaatcccggcctcgcctccctcctcgag
ctccgcctccgctctctcctcaccgccgaccccgctccaccacctccgcctgctctcctc
cacaacaccgcgcccgccgccccaactgtcgcggcgctccctccccctcccccgcttcca
gacaagcgccgccacgaaccgccgtgtcaagaggagccgaacccgccgccgcagtcgccg
aaggtccccaccgcggaggagactgccgcggcagccgcggccgcggctgctgcggccgcg
aaggagaggaaagaagagcagcggcggaagcagcgtgacgaggagggtctacacctgctg
acgctgctgctgcagtgcgccgagtcggtgaacgcggacaacctcgacgacgcgcaccag
acgctgctggagatcgcggagctcgccacgccgtttggcacctccacgcagcgcgtcgcc
gcctacttcgccgaggccatgtccgcgcgcctcctcagctcctgcctcggcctgtacgcg
ccgctgcctcccgcgtcccccgccgcggtgcgcgtccacggccgcgtcgccgcggcgttc
caggtgttcaacgggatcagccccttcgtcaagttctcgcacttcacggcgaaccaggcc
atccaggaggcgttcgagcgggaggagcgcgtccacatcatcgacctcgacatcatgcag
gggctgcagtggccgggcctcttccacatcctcgcctcgcgccctggtggcccacccagg
gtcaagctcaccgggctgggcacgtctatggaggcgctcgaggccacggggaagcggctc
tccgacttcgccgacacgctggggctgccgtttgagttctgcgccgtggcggagaaggcc
gggaatgtcgacccggagaagctggccgtgacgcggcgcgaggccgtcgccgtccactgg
ctgcaccactcgctctacgacgtcaccggctccgactccaacacgctgtggctcatccaa
aggttggcacctaaggtggtgacaatggtggagcaggacctcagccactcaggctccttc
ctggcgcgtttcgtcgacgccatccactactactctgcgctgttcgactcgctggatgcg
agctacggcgaggacagcgcggagcggcatgtcgtggagcagcagctgctgtcgagggag
atcagcaatgtgctggccgtgggcgggccggcacgcaccggcgacgtcaagtttgggagc
tggcgcgagaagcttgcgcagtcggggttccgtgcggcgtcgctcgctggcagtgcggcg
gcgcaggcctcgctgctgctcggcatgttcccctccgacgggtacacactggttgaggag
aacggtgctctgaagctcggatggaaggatctctgcctgctcactgcatctgcttggcgc
ccaattcagacctcaggccgttga
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