Phragmites australis (common reed): 133905364
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Entry
133905364 CDS
T10575
Name
(RefSeq) clathrin heavy chain 2-like isoform X1
KO
K04646
clathrin heavy chain
Organism
paua Phragmites australis (common reed)
Pathway
paua04142
Lysosome
paua04144
Endocytosis
paua05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133905364
04142 Lysosome
133905364
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133905364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133905364
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paua04147
]
133905364
Membrane trafficking [BR:
paua04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
133905364
Exosome [BR:
paua04147
]
Exosomal proteins
Proteins found in most exosomes
133905364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
133905364
NCBI-ProteinID:
XP_062203111
LinkDB
All DBs
Position
22:474325..484534
Genome browser
AA seq
1739 aa
AA seq
DB search
MAAANAPIAMREALTLTSLGIAPNFVTFTHVTMESEKYICVRETSPQNSVVIIDMAMPMQ
PLRRPITADSALMNPNTRILALKAQIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPAKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFATFKVVGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQISQKYGLVYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAESSTTGGFYAINRRGQVLHATVNDATVVPFVSGQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRALQVSTFALVQLIISLCFSGT
NLIYVVMQHYSELPDIKRVIVNTHAIEPQALVEFFGTLSKEWALECMKDLLLVNLRGNLQ
IVVQAAKEYSEQLGVDACIKLFEQFKSYEGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQ
IKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYI
EGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQ
FLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVA
YRRGQCDDELINVTNKNSLFKLQARYVVERMDGDLWDKVLQPENEYRRQLIDQVVSTALP
ESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRV
MDYVNRLDNFDGPAVGEVAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFAF
RVEEDAVWSQVAKAQLREGLVSEAIESFIRADDAAHFLDVIRAAEEANVYNDLVKYLLMV
RQKAREPKVDGELIFAYAKIDRLSDIEEFILMPNVANLQNVGDRLYDAELYEAAKIIYAF
ISNWAKLAVTLVKLKQFQGAVDAARKANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQV
DDLDEVSEYYQNRGCFSELISLMESGLGLERAHMGIFTELGVLYARYRTEKLMEHIKLFS
TRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPDAWDHMQFKDVCVKVAN
VELYYKAVHFYLQEHPDLINDMLNVLALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSNNV
TAVNEALNELYVEEEDYERLRESVDMHDNFDQIGLAQKLEKHELLEMRRIAAYIYKKAGR
WKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVYFIEQGKKECFASCLFICYDLIRPD
VALELAWMNNMVDFAFPYLLQFIREYTIKVDDLVKDKIESQKEERAKKEEEKDLVAQQNM
YAQLLPLALPAPPMPGMGGPPSMPGMGGPPPMPGMGMPPMGGMGMPPMPAFGMPPMGSY
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccaacgcccccatcgccatgcgcgaggccctcacgctgaccagcctgggc
atcgcgcccaacttcgtcaccttcacccatgtcaccatggagtcggagaagtacatctgc
gtccgcgagacctccccgcagaacagtgtcgtcatcatcgacatggccatgcccatgcag
ccactccgacgacccatcaccgcggactccgcgctcatgaaccccaacaccagaatcctc
gcactcaaagctcaaatacctggaacaacacaggatcaccttcaaatatttaatattgag
gctaaaacgaaaataaagtctcatcagatgccagagcaggttgtgttttggaaatggatc
acgcctaagctgttgggtttagtaacacaaacatcagtttatcattggtcaattgaaggt
gattctgaacccgccaagatgtttgataggacagctaatttggcaaataatcagatcatc
aactatcgatgtgacccatcggagaagtggcttgtgcttattggaatcgcacctggtgct
ccagagaggccacaactggtgaagggaaatatgcaacttttttctgttgatcagcagcgt
agccaagcacttgaagcccatgcagcatcttttgcaacatttaaggttgttggtaacgag
aacccgtcaacactcatctgttttgcctcaaagacaactaatgctggacagatcacttca
aagttacatgttattgaactgggtgcccagccagggaaacctggcttttctaagaagcaa
gccgacctcttctttccaccagatttccaggatgattttcctgtggcaatgcagatctca
caaaagtatggccttgtctatgtaattacaaagcttggccttttgtttgtatatgacttg
gaaactgccgcagcagtttacagaaatagaatcagcccagatcctatattcttgacagca
gaatcctccacgacaggtggtttttatgccatcaacaggagagggcaggttttacatgcc
acagttaatgatgcaaccgttgtgccttttgtcagtggtcaattaaacaaccttgagctc
gctgtgaatcttgccaagagagctaatcttcctggtgcagagaacttggttgtgcaaaga
ttccaggaactgtttgcacaaacgaaatacaaagaagcagctgagctggctgcagaatct
cctcagggcctcctgaggacacctgatactgttgcaaaatttcagagtgttcctgtgcaa
gctgggcaaacacccccactgttgcagtactttggtacattgctaactcgagggaaactc
aatgctttcgagtctcttgagctctctcgacttgttgtcaatcagaacaaaaagaacctt
ctggaaaattggttggcggaagacaagctggagtgcagtgaagaacttggagatcttgtc
aagactgtggacaatgatcttgcactgaaaatatacataaaggctagggcgactcctaaa
gttgttgctgcttttgctgaaaggagggagtttgacaagatacttatatattcaaagcag
gttgggtacactccagattatcttttcctcctccagaccatcttacgcacggatccacag
ggtgctgtgaactttgctctcatgatgtcacaaatggagggaggttgtccagtagattac
aatactataactgatctcttccttcagagaaacctgatacgagaggcaacagcttttctg
ttggatgttttgaaacctaacttgccagagcatgcttttcttcaaaccaaggttttggag
atcaacttagtgacatacccaaacgttgctgatgccattcttgctaatggtatgttcagt
cattatgaccgccctcgtattgctcagctgtgtgaaaaggctggcttgtacctgcgagcc
ctccaggtgagtacctttgcattggtgcagttaattatttctctttgcttctctggaact
aatcttatatacgttgtgatgcagcattactcagagttacctgatatcaagcgtgtcatt
gtaaatacccatgccattgagccacaggcacttgtggagttcttcggcaccctttcaaaa
gagtgggcattagagtgcatgaaggaccttctactggtcaatctgaggggaaatcttcaa
atagttgtgcaggctgcgaaagaatactcggagcagctaggagttgacgcttgcataaaa
ctatttgagcagttcaaatcttacgagggcctttactttttcttgggatcctatctgagt
tccagtgaggacccagatatccatttcaaatacatagaagcagctgcaaggactggacag
atcaaagaagttgaacgtgtaaccagagagtctaacttttatgatgctgagaagacaaag
aactttttgatggaagcaaaactacctgatgcccgcccactgattaatgtttgtgaccgc
tttggttttgttccagatctaactcactatctgtatacgaacaatatgcttcggtatatc
gaaggctatgtacagaaagtgaatcctggaaatgctcccttggtagtggggcaactactc
gatgacgagtgccctgaagatttcatcaagggtttgattctctctgttcgttctctcctt
cctgttgagccactagttgatgaatgcgagaagaggaaccggctacggttgctcacacag
ttcttggagcacttagtgagtgagggtagccaagatgtgcatgtccacaatgctcttggg
aaaatcatcattgacagcaacaataatccagagcatttccttaccaccaacccattttat
gactctcgtgttgtgggtaaatactgtgaaaagcgggatcctacacttgctgttgttgct
tacagacgtgggcagtgtgacgatgaacttattaatgtcactaacaaaaactcactgttc
aagctgcaagctagatacgtcgttgaaagaatggatggtgacctgtgggataaagttctt
cagcctgaaaatgaatataggaggcaactcattgaccaagtggtttctaccgcattgcct
gagagcaagagccctgagcaagtgtctgctgctgttaaggctttcatgacagccgacctc
cctcatgaactgatcgagcttctcgaaaagattgtccttcagaattccgcgttcagtgga
aacttcaatctgcagaacttgctcatcttgactgccatcaaggcggacccatccagagtc
atggactatgttaacagattggacaactttgatgggcctgccgttggagaagttgctgtt
gaagcacaactgtacgaggaggcttttgctatattcaagaagttcaacttaaacgtgcag
gctgtcaatgttctcttggataacatccgaagcatagaaagagctgaagagtttgctttc
cgtgttgaagaagatgctgtttggagccaggttgctaaggcccagttacgtgaaggttta
gtcagcgaggcaattgagtccttcattcgtgcagatgatgcagcacattttcttgatgtc
atccgtgctgctgaggaagccaatgtgtacaatgacttagttaagtaccttctgatggta
aggcaaaaggcaagagagcccaaagtcgatggagaactcatctttgcatatgctaagatt
gatagactcagtgacattgaagagttcattcttatgccaaatgtcgccaacctccaaaat
gtcggtgaccgtctgtatgatgcagaactatatgaagctgcaaagataatctatgccttc
atctcaaactgggctaagctggctgttaccctggttaagctgaagcagttccaaggtgct
gtggatgctgctcgcaaggctaacagtgctaaaacatggaaggaggtctgctttgcttgt
gttgacgctgaggagttccgtcttgcacagatatgtggtctcaatattattgtccaggtt
gatgacttggatgaagtgagtgaatactaccaaaatagaggatgcttcagtgaacttatc
tctctcatggagagtggtcttgggcttgaacgtgcacacatgggcatctttacagaattg
ggagttctgtatgctagataccgcactgagaagctaatggaacacatcaaacttttctcc
acccgtctcaacattcctaagcttatccgggcttgtgatgagcaacaacactggaaagaa
cttacctacctatacatacagtatgatgaatttgacaatgctgccaccactatcatgaac
cattctccagatgcatgggatcatatgcaattcaaagatgtttgtgttaaagttgcaaat
gttgagctatattacaaggcagtgcacttctatttgcaagagcacccagatctcatcaat
gatatgctaaatgttcttgcgcttcgtttagatcataccagagttgtagacataatgcgc
aaggctggtcagttgcatcttgtgaagccgtatatggttgcagttcagagtaacaatgtc
actgctgtgaatgaagcgttgaatgagctttatgttgaagaggaagactacgagagactc
cgtgaatcagttgatatgcatgataactttgatcagataggtcttgcccagaagcttgag
aagcatgaattgcttgagatgaggaggattgctgcctacatttacaagaaggctggcaga
tggaagcaatccattgctctatcgaagaaagacaacatgtacaaggattgcatggagaca
tgctcacagtctggtgaccgtgagctgtcagaggacttgcttgtctattttatcgagcag
gggaagaaagaatgctttgcttcttgcctcttcatttgttatgacttgattcggccggat
gttgctcttgagcttgcatggatgaacaacatggtggactttgctttcccatatctgttg
cagttcattcgtgaatacactatcaaggtcgatgatttagtgaaggacaaaattgaatca
caaaaagaagaaagagccaaaaaggaggaggaaaaagatcttgttgctcagcagaacatg
tacgcacaattgcttcctcttgccttgcccgctccaccgatgcctggtatgggtggtcct
ccatcgatgcctggtatgggcggtcctccaccgatgcctggtatgggcatgcctccaatg
ggtggaatgggtatgcctccaatgccagcatttgggatgcctccaatgggaagctactaa
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integrated database retrieval system
