Phragmites australis (common reed): 133905413
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Entry
133905413 CDS
T10575
Name
(RefSeq) RNA-directed DNA methylation 4-like isoform X1
KO
K28237
RNA polymerase II nuclear localization protein
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133905413
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
133905413
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Gene cluster
GFIT
Motif
Pfam:
Iwr1
DUF1499
FAM161A_B
Motif
Other DBs
NCBI-GeneID:
133905413
NCBI-ProteinID:
XP_062203159
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Position
22:612747..617451
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AA seq
328 aa
AA seq
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MASEAAAGEASTSEPAAKEKPIVVRVKRKPSQTRPDAFWLEINERPVKKAMLDLSSLSIS
EPSSSAAGAKASEEPRVRKILVQHIETVHHSEAVEDVLHSLLLADSNTQEIKSKRKEWND
RIKQDKKQDQLRSAARQQHEDLGRNARFAQIWRSRKGEKNEVDESLREICHLYDAAQVDP
DEEKHPAEPRIISFEEGAVLCNFLPLIREYLPSAAEEIESDIISLASSEDSEVYDIYTVK
EVDDTNMDDTSAASFPLLQVADDEDECYDDDYPYDTDDSNAEDNPVFDYPEELSESEGDG
RDGEDSFGDMEGSDSDYEKEEVEVEEDE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgaggcggcagccggagaagcgtccacctcggagcccgcggcaaaggagaag
cctatcgtcgtccgggtcaagcgcaagccctcgcaaacccgtccagacgcgttctggctg
gagattaatgagaggccggtgaagaaggcgatgctcgacttatccagcctttccatctcc
gaaccctcctcctccgccgccggtgctaaagcttcagaggaaccacgagttaggaagatt
ctagtccaacacattgagacagtacaccattccgaagctgttgaagatgttttgcattct
cttttgcttgctgactcaaatacccaagagataaagagcaagagaaaggagtggaatgac
agaatcaagcaagacaaaaaacaagaccagctacgatcagcagccagacaacagcatgag
gatctgggaagaaatgctcgctttgcacaaatatggaggagtcggaaaggagaaaagaac
gaagttgatgaatcactgagagaaatatgccatctttatgatgctgcccaagtagaccct
gatgaagagaagcacccggcagaaccacggattatctcttttgaagagggtgctgtttta
tgcaactttcttccgcttatacgggagtacttgccatcagctgctgaagaaattgaatca
gatattatttcactggcatcgtcagaagattcagaagtttatgacatatatactgttaag
gaggtggatgatacaaatatggatgacacatcagcagcttcatttccactgttacaagtg
gctgatgatgaagatgaatgctacgatgatgactatccatatgatacagatgattcaaat
gccgaagataatccagtattcgattatcctgaagagctgtcggagagtgaaggtgatggt
agagacggtgaggattcttttggggacatggaaggttctgattcggattacgagaaggaa
gaagtagaggtggaagaagatgagtag
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