Phragmites australis (common reed): 133905591
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Entry
133905591 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133905591 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paua03016
]
133905591
Enzymes [BR:
paua01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
133905591
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
133905591
Prokaryotic type
133905591
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
133905591
NCBI-ProteinID:
XP_062203396
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Position
22:6240624..6251751
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AA seq
392 aa
AA seq
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MSATSTNPDPAASTKRPFDPSLADPSPPSKIQRSSEPDPAPAGNTDGATDAGEVAGVESM
AMAGARNPRAQRYLLAVEYVGTRFSGSQQQPNQRTVVGVLEEAFCRFIGQPVSIFCSSRT
DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVKRAVNHFLQKNEGDIMVTDVRCVAP
DFHARYKALERTYHYRLLSGLEPMPVFEKNSAWHIPEDLDIEAMKKACSILIGHHDFSSF
RAAGCQANSPMRTLDELTVTEVFPFMFFPSSLERSEMESSDGSLVYLRTAALESSGKGSD
GSRTSIGKSESDEGKEFGKRLRHRCFVVTARSRSFLYHQVRLMVGLLKSVGTGNLTTADV
ERILNAKAVTAAPPMAPACGLYLANVKYDLSV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaccagcaccaaccccgaccccgctgcctcaaccaaacgccccttcgacccg
tcgctcgccgacccctctccgccgtccaagatccagcggtcctccgagccggaccccgcg
ccggcgggaaacacggacggcgccactgacgccggtgaggtggcgggggtggagagcatg
gcgatggccggggctcggaaccctcgggcgcagaggtacctgctcgcggtggagtacgtc
ggcacccgcttctccggctcccagcagcagcccaaccagcgcaccgtcgtcggcgtcctc
gaggaagcattttgcagattcattggacagccagtctcaatcttctgttctagtcgaacg
gatgcaggtgttcatgctttatcaaatgtttgtcatgttgatgtggagcggataagtaaa
aggaagcctggtgaagtgttgccacctcatgagcctggagttgtaaaacgtgctgtgaac
cactttcttcagaagaatgaaggtgacataatggtgactgatgttcgttgcgttgcacca
gatttccatgctagatacaaagctcttgagcgcacatatcactatcgtttgctttctgga
ctcgagccaatgccagtctttgagaaaaactctgcttggcacatacctgaggatctagac
attgaggcaatgaagaaagcatgcagtatacttattgggcatcatgacttcagttcattt
cgagcagctgggtgtcaggcgaactccccaatgagaactttggatgagcttactgttacg
gaagtatttcctttcatgttttttccttcaagcttggagcgatcagagatggaatcatcg
gatgggtctcttgtttatttgaggacagcagccttggaatcttctgggaaaggatctgat
ggatcccgtactagcattgggaaatcagaatctgacgaagggaaagaatttggaaagaga
ttaaggcaccgctgctttgttgttactgcaaggtcacggtcttttctttaccaccaggta
aggttgatggtgggtcttctaaaatctgttgggactggaaatctaacaactgcagatgtt
gagagaattctgaatgcaaaggcggtgactgctgcacctccgatggcacctgcttgtggt
ctgtacctggctaatgtgaaatatgatctgagtgtttga
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