Phragmites australis (common reed): 133905841
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Entry
133905841 CDS
T10575
Name
(RefSeq) protein spotted leaf 11
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133905841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133905841
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133905841
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
U-box type E3
133905841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
Neurochondrin
Arm_2
KAP
zf-Nse
zf-C3HC4_4
zf-C3HC4_2
ARM_LIN_C
zf-C3HC4
MLKL_N
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
133905841
NCBI-ProteinID:
XP_062203599
LinkDB
All DBs
Position
23:complement(20092985..20098161)
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AA seq
679 aa
AA seq
DB search
MAGDRRGEPPVAAAKERVAAAVEAVASGGWEFRNAYRRQLLALSRRIRLLGPFSEELREA
RRAPADEEEERALAPLAEALEKALELLRLGREGSRIFLVLQRDNVMKKFQEVIAQLEQAL
SDFPYNKLDISDEVREQVELVLAQLRRAKERVDMPDDEFYNDLLSLYNKSYDPSAELAIL
ERLSEKLYLMTITDLTQESLALHEMVASGGGQDPGEHIEKMSMLLKKIKDFVQTQNPEMG
PPIASKLMDSNGDPRPVTIPDEFRCPISLELMKDPVIVATGQTYERACIEKWLGSGHHTC
PTTQQRMANTTLTPNYVLRSLIAQWCEVNGMEPPKRSSQPNKPTSACSSSERANIDALLF
KLCSPDPEEQRSAAAELRLLAKRNASNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALL
NLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGTGAIP
ALVVLLSEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMA
ILSILSSHPEGKAAIGAAEPVPVLVEMIGSGSPRNRENAAAVMLHLCSGEYQLKHLARAQ
ECGVMVPLRELALNGTERGKRKAVQLLERMSRFLVQQQEEQEAQLQASAQALPQAPEQIQ
ETDTPEQLDSPAPQYPVGP
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgaccgcaggggggagccgcccgtggcggccgcgaaggagcgggtggccgcg
gcggtggaggcggtggcgtcgggcggctgggagttccggaacgcgtaccggcgccagctg
ctggcgctgtcccgccggattcggctcctgggtcccttctccgaggagctccgggaggcg
cgccgggcgcccgcagatgaggaggaggagagggcgctggcgccgctcgccgaggcgctg
gagaaggcgctggagctgctccggctcggccgcgaggggagcaggatcttcttggtcctt
cagagggataatgtaatgaagaagtttcaagaagtaattgctcagctggagcaagctttg
agtgattttccatacaataaattggatatatcagatgaagttagagagcaggttgagcta
gtgcttgcacagctcagaagagcaaaagaacgggttgatatgcctgatgatgagttctat
aatgacctactgtctctgtataacaagagctacgacccaagtgctgaactggctatcctt
gaaagattgtcagaaaagttatacctgatgaccatcaccgatctcacacaagaatctctt
gctttgcatgagatggtggcatccggtggtggtcaggacccaggagaacacattgagaaa
atgtcgatgctactgaagaagatcaaggactttgtgcaaacccaaaaccctgagatgggc
ccgccaattgcttccaagctaatggattccaacggggacccaagacctgtaaccattcct
gatgagttccggtgtccaatttctcttgagctgatgaaagatcctgttatcgttgctact
ggccagacatatgagcgggcgtgcatcgagaaatggctaggttctgggcatcacacttgt
ccaactacacaacagaggatggcaaacacgacattgacaccaaactacgttcttagaagt
cttatcgcccagtggtgtgaagtcaatgggatggagccacccaagcgctcgtcgcagcct
aacaagcctacatccgcatgctcttcgagcgaacgtgctaacatcgatgctcttctgttc
aagttatgctctccagatcctgaggagcagaggtcagctgctgcagagcttcgccttcta
gcaaagcggaatgcaagcaaccggatctgcattgctgaggccggtgccatccccttgcta
ttgagtctactgtcgtcatctgacctgcggactcaagaacatgctgttactgcacttctg
aacctctccatacatgaggataacaaggcaagcatcatatcctctggtgctgtgccgagc
atagttcatgttctgaagaatggcagcatggaggcacgggagaatgctgcagccacgctt
tttagcctctcagtgatcgatgaatacaaagtaacaatcgggggaacaggggctatccct
gcccttgtagttttgctaagtgagggcagccagcgggggaagaaggacgctgcagcagct
ctattcaacttgtgcatttaccaagggaacaagggccgtgcgatacgagctggccttgtg
ccgctcatcatggggctggtgacaaaccccacgggagctctcatggacgaggctatggca
atactctcaatactgtccagccaccctgaggggaaggcagccattggggcagcagagcct
gttcctgtgcttgtggagatgatcggaagtgggtcgccgagaaatagagagaatgctgca
gctgtgatgttgcatctttgcagtggtgagtatcagcttaagcatttggctcgtgcacag
gagtgcggggtcatggtccctttgcgggagctggcactgaacggcacggaaagggggaag
aggaaggcggtgcagctgctcgagcggatgagcagattcctggttcagcaacaagaggaa
caggaagcccagctgcaggcatcggcacaggccctccctcaggcccccgaacagatccaa
gagactgatacccctgaacaattggatagtcctgcgcctcagtaccctgtagggccatag
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