Phragmites australis (common reed): 133905860
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Entry
133905860 CDS
T10575
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic-like isoform X1
KO
K02945
small subunit ribosomal protein S1
Organism
paua Phragmites australis (common reed)
Pathway
paua03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
133905860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
paua03011
]
133905860
Ribosome [BR:
paua03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
133905860
Bacteria
133905860
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
133905860
NCBI-ProteinID:
XP_062203629
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Position
2:complement(26549127..26552203)
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AA seq
435 aa
AA seq
DB search
MPAPATPRGLLSPPSRPQPILPVARAVVPMQTPVQARARAQPVALARSKRLDDTLAAGFV
RLLNATPGQGEDASGGGGGERYDPKPGDFVVGVVVSGTEARLDVAVGADRLATLLAKELL
PLHRAGAEPAAGAAAPRPGSVGVVASPDVDEEEAVRKQKRGSRALVAPGTVVFAEVLGRT
LSGRPLLSARRLFRRLAWHRARQIMQHDEPIEVKIYQWNTGGLLTRIEGLRGFLPKFELM
DRISTFADLKNKVGRSIGVCITRLNEETNDLIISEKKAWEMTYLKEGTLLQGTVRKIFPY
GAQVRIAGTNRCGLLHISNISRGRVLSACDILKIDDEVKVLVIKSNVPDKIALSIGYLES
APGLFLSDKAKVFSEAEEMAKRYREQLPVISQNTKLDDGLPGGTIPFDDEATLYANWKWF
KFLQHSKPGDDSNGT
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgccggcgacgccgcgcggcctcctctctcccccctccaggccgcagcccatc
ctccccgtggccagagccgtggttccaatgcagaccccggtccaggcccgagcgcgggca
cagcctgtcgcgctcgccaggtccaagcgcctcgacgacacgctcgccgctggcttcgtc
cgcctccttaacgctacccccggacagggcgaggatgcctccggcggaggaggaggcgag
cgctacgaccccaagccgggggatttcgtggtcggggtcgtggtctccggcaccgaggcg
cgtctcgacgtcgccgtcggcgccgaccgcctcgccacgctcctcgccaaggagctcctc
ccgctccaccgcgccggcgctgaaccggcggcgggagcggctgcgcctcggccggggagc
gtgggcgtcgtggcgagccccgacgtggacgaggaggaggcggtccggaagcagaagcgc
gggagcagggcgctggtggcgcccggtacggtggtgttcgcggaggtgcttggccggacg
ctcagcgggaggccgctgctgtcggcgcggcggctcttccggcgcctcgcgtggcaccgc
gccaggcagattatgcaacatgacgagccaattgaggttaaaatttaccagtggaacacc
gggggtctactcacaagaattgaggggctgagaggattccttcctaaatttgagctcatg
gataggataagtacgtttgcagacttgaaaaacaaagttggccgcagcataggtgtgtgc
attacaaggctcaatgaagaaactaatgacctgataataagtgaaaagaaagcatgggaa
atgacttatcttaaagaaggaactctcctacaagggactgttcgcaagatttttccatat
ggtgcacaagttaggatagctgggacaaacagatgtggattattgcacatctccaacatt
agtcgaggccgtgttttgtcagcatgtgacatcctgaagatagatgatgaggtgaaagtt
ctcgtgatcaagtcaaatgtcccggacaaaattgccctcagcataggatacctcgagagt
gcacctggtttgtttctttctgacaaagcgaaggtgttctcagaagctgaggagatggca
aagagatacagggagcaacttccagttatttctcagaacactaagttagatgatggcctt
ccaggaggaacaattccatttgatgacgaagctacactatatgcaaactggaaatggttc
aaatttctgcagcatagcaaacctggtgacgacagcaatggaacatag
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