Phragmites australis (common reed): 133905893
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Entry
133905893 CDS
T10575
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133905893
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
133905893
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GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
MMR_HSR1
RsgA_GTPase
AAA_28
AAA_27
AAA_22
AAA_16
AAA_30
AAA_15
Motif
Other DBs
NCBI-GeneID:
133905893
NCBI-ProteinID:
XP_062203668
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Position
23:complement(15091703..15095489)
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AA seq
597 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAAAASSSSSSASAATAAQKAANGVEALKLSDRTCTG
VLASHPLSRDIHIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRE
LPIPEHMDIYHLSHEIEASDMSALQAVVSCDEERVKLEKEAEILSAQDDGGGEALDRIYE
RLDAMDASTAEKRAAEILFGLGFTKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDE
PTNHLDLEACVWLEEMLKKFDRILVVISHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYV
QTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEK
VVRDKVLVFRFTDVGKLPPPVLQFVEVKFGYTPDNLIYKSLDFGVDLDSRIALVGPNGAG
KSTLLKLMTGDLSPLDGMVRRHNHLRIAQYHQHLAEKLDLDMSALAYMMKEYPGTEEEKM
RAAVGRFGLTGKAQVMPMMNLSDGQRSRVIFAWLAYRQPQLLLLDEPTNHLDIETIDSLA
EALNEWDGGLVLVSHDFRLINQVAQEIWVCENQAVTRWEGDIMEFKAHLKSKAGLSD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggacgccagcaagaagaaggccgcgcagaagaaggccgccgcggccgccaag
aggggaggcaaggcggcggctgcgtcgtcctcatcgtcatccgcgtcggctgccacggcc
gcccagaaggcagcgaacggcgtggaggcgctcaagctctccgaccgcacctgcaccggg
gtcctcgcgtcccacccgctctcccgcgacatccacatagagtctctttccttaacattt
catgggcatgaccttattgtggattctgagttggaactgaactacgggaggcgatacggt
ttgcttggtttgaatggatgtggaaaatctactcttctcacagcaataggctgcagagaa
cttcctatccctgaacacatggacatataccacctcagccatgagattgaagcttcagac
atgtctgcactacaagctgttgttagctgtgacgaagaaagagtgaagttggaaaaggaa
gctgaaattttatctgcacaggatgatggtggtggtgaagctttggatcgtatatatgag
cgtctagatgcgatggatgcatcaactgctgaaaagcgtgctgctgagatactatttggt
ttaggctttaccaagcaaatgcaggcaaagaaaactcgggatttttctggtggttggcgt
atgaggattgctttggcaagagcactgttcatgaatccaacaatccttttgcttgatgag
cccacaaaccatcttgatcttgaggcgtgtgtctggttggaagagatgctaaagaaattt
gaccgcatacttgtcgtgatatcacactctcaagactttctgaatggagtgtgcactaac
atcatccacatgcagaacaagaagctaaagttgtacactggtaattatgaccagtatgtt
caaacccgctccgagctggaagaaaatcaaatgaagcagtacaaatgggagcaagaacag
attgcttcaatgaaagagtacattgcacggtttggtcatggttctgcgaagctcgcacgc
caagctcagagcaaagagaaaactcttgcaaagatggagcgtggtggtctcactgagaag
gttgttagggacaaagtactggtgttccgctttacagatgttggcaaacttccaccacca
gtgctacagtttgttgaagtcaagtttgggtatacaccagataatctgatatacaagagc
cttgactttggtgttgatctcgattctagaattgcactggttggtcccaatggggctgga
aagagcactcttctgaagctcatgacaggtgacctgtctccattagatggcatggtcagg
cgccacaatcacctgcgcattgcccagtaccatcaacatctcgcagagaagctggacctg
gacatgtcggccctggcttatatgatgaaggaataccctgggacagaagaagagaagatg
agagctgcagtcggtaggtttggcctgacagggaaggcgcaggtgatgccaatgatgaat
ctctctgatgggcagaggagccgtgtcatctttgcatggctggcatataggcagccgcaa
ctgctgctgcttgacgagccgacgaatcacctggatatcgagaccattgattccctggcg
gaggcactgaacgagtgggacggtggtttggtcctggtgagccatgacttcaggctgatc
aaccaggtcgctcaagagatctgggtgtgtgagaaccaggcagtaaccaggtgggaaggt
gatatcatggagttcaaggcccacttgaagagcaaggctggtctatctgattag
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