Phragmites australis (common reed): 133905918
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Entry
133905918 CDS
T10575
Name
(RefSeq) cyclin-T1-4-like isoform X1
KO
K15188
cyclin T
Organism
paua Phragmites australis (common reed)
Pathway
paua03250
Viral life cycle - HIV-1
Brite
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
133905918
Brd4/P-TEFb complex
133905918
7SK RNP complex
133905918
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NCBI-GeneID:
133905918
NCBI-ProteinID:
XP_062203709
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Position
23:16361902..16369138
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AA seq
718 aa
AA seq
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MTAEKKKNPRSLGFFVFRSSYLQPTTRRPLPPLTPRPRPHPREAAAAVARGERLRLGELG
APPVAAASPAPSVLRAAAPAAASSAAAGGRKTLAADESLIRKLLTDQELNSSSVRAEYNL
AYMAMVPSDSSHHGVVENSPNGFTQGRREEAGKLGASWYFSRKEIEENSPSRRDGIDLKK
ESYLRRSYCSFLQDLGMKLKVPQVTIATAMVFCHRFYLRQSHAENDRRTIATVCMFLAGK
VEETPRPLKDVILVSYEIIHKKDPAAGQRIKQQKEIYDKQKELILLGERAVLVTLGFDLN
VHHAYKPLVEAIRRFNVGGKNALPQVAWNFVNDGLRTSLCLQFEPHHIAAGAIFLAAKFL
KEKLPSDGDKIWWQEFDVTPRQLEEVSNQMLELYEQNRDRATQAQPSLGNEAEASSATVR
NQRSSVKSEGNSKESSAHGYHQALKQSNSQHSSSTGAPGHHDDEHSNPEKHISGHKMLQK
DYGDHGGSKERSNQSGSRFDAGMDISHQDKKSLPGHQYPKSSYESDHPMERKPHKSHDSS
NETKDGVLDSNEAPSVSTSMMDAMNKIDKDKVKAALEKRRKSKGDVGTKVNVMDDDDLLE
RELEHGVELAVEDEKIKQDKRQNLSHGSIHGGDLQNADQVTENGHHGKQCVPTTTEDGEF
PLDSKEQHLPPLDKQNNVAEHQSQQSDHTLKHHQSHDAQLAGRHEQGERDCKKPKLEG
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagaaaaaaagaaaaatccaaggagtctagggtttttcgtttttcgttcgagt
tatctccagcccacgacgcgccggccccttcctccccttacgcctcgacctcgaccccac
ccccgcgaggcggcggcggcggtggcgcgcggcgagcggctgcgtctcggtgagcttggc
gccccccctgtggccgcggcgtccccggcgccatctgtcctgcgggctgctgctcccgcg
gcggcttcgtcggctgcagcgggcggccgcaaaaccctagcggcggatgagagcctgatt
aggaagcttttgacagatcaagaactaaattcttcatcagttcgtgctgaatataactta
gcttacatggctatggtgccaagtgattcatcacatcatggagttgtagaaaatagcccc
aatggctttacccaaggtaggcgtgaggaagctgggaaacttggtgcatcatggtatttc
agtagaaaggaaatagaagaaaattctccatccaggagggatggcattgatttgaagaaa
gagtcttaccttcgaaggtcgtattgcagttttctacaagatttgggcatgaagcttaaa
gtgcctcaagtgacgattgctacagctatggtattctgtcaccgtttttaccttcgccaa
tcccatgcagaaaatgatagacgaacaattgccaccgtttgcatgttcttggctggaaaa
gtcgaagaaacacctagacctttgaaggatgtcatcctggtttcttacgagattattcat
aagaaggatcctgctgctggtcagagaatcaagcagcagaaggaaatatatgataaacaa
aaagaacttattttacttggggagcgagctgtacttgtaacacttgggtttgacctgaat
gttcaccatgcttacaagcccttggttgaagcaataaggagattcaatgttggtggtaaa
aatgcacttcctcaggttgcttggaattttgtaaatgatgggctgcgtacctcgctttgc
ctgcaattcgagcctcatcatattgcagcaggtgctatctttttggctgctaaatttctc
aaagagaagcttccatctgatggtgataagatttggtggcaggaatttgatgtgactcca
cggcaacttgaagaggttagcaatcaaatgttggagctgtatgagcaaaaccgtgaccgt
gcaacacaggcacaaccatcactgggaaatgaagctgaagcgagctcagctactgtgcgt
aatcaacgatcctctgtaaaatctgaaggaaactccaaggaatcatctgctcatggatat
catcaggcactcaagcagtcaaattcgcagcattcttcctcaacaggtgctccaggtcac
catgacgacgagcactcaaatccagaaaagcatatttctggccacaaaatgcttcaaaaa
gactatggtgaccatggtggcagcaaagaaaggagcaaccagagtggaagtagatttgat
gctggcatggacatttcacatcaggacaaaaaatccttgccaggacatcagtatcccaag
tccagttatgagtctgatcatccaatggaacgtaagccacataaatcacatgatagttcc
aatgaaacaaaagatggtgttcttgacagcaatgaagctcccagtgtgtcaacctccatg
atggacgcgatgaataaaattgacaaggataaggtaaaagcagctttggagaagcgaaga
aaatcgaaaggtgatgttggtacgaaggtaaatgtgatggatgatgatgatctacttgag
agagagctagaacatggtgttgaattagctgttgaggatgagaagatcaagcaggataag
aggcagaacttgtcccatggtagcattcatggaggggatcttcaaaatgctgaccaagtt
acggagaatggtcaccatggcaagcagtgtgtgccaacgactactgaagatggggagttt
ccattggacagtaaagaacagcatcttccaccattggataagcaaaataatgttgccgag
caccagtcccagcagtctgatcacacattgaagcaccaccagagccatgatgctcaactt
gctggaagacatgagcagggtgaaagagactgtaaaaagcctaagctcgaagggtag
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