Phragmites australis (common reed): 133906102
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Entry
133906102 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133906102
KO
K24741
WD repeat-containing protein 20
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
paua04990
]
133906102
Domain-containing proteins not elsewhere classified [BR:
paua04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
133906102
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_Nup120_160
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
Cytochrom_D1
eIF2A
Beta-prop_Vps41
Beta-prop_HPS5
Ge1_WD40
YpsA
Motif
Other DBs
NCBI-GeneID:
133906102
NCBI-ProteinID:
XP_062203872
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Position
23:3567323..3573340
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AA seq
519 aa
AA seq
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MAGAPAAPGAGAGAGGGAAAGLKTYFKTPEGRYKLQYEKTHSALLHYSHGGKTVSQLTVA
YLKEKPAGQGSMPSTPSSSSGMRSAAARLLGTGNGSRAHIFAGSNGVSRAVSGSSRIGGG
LGTSTGLGGPQGVANYDGKGTYIIFNAADTLFISDLNSQDKDPIKSIHFSNSNPLCHAFN
SEAKEGHDLIIGMGSGDVYSMSLRQQLQDPGRKPVAAQHYNKGDKDVTPNGSRCTSIAWV
PEREGIFVVSHSDGNLYVYDKNKDGSTDCTFPALKDQSQFTVSHAKSSKSNPIARWHICQ
GSINAISFSPDGAYLATVGRDGYLRVFDFSKEQLIFGGRSYYGALLCCTWSSDGKYLLTG
GEDDLVQVWSMDDRKIVAWGEGHNSWVSGVAFDSYWSPPSSDGTGENVYRFGSVGQDTQL
LLWDLALDEIVVPLRHPSSCSPTFSSGSPSAHWDNACPPAGILQPSPRMQDVPKLSPLVS
NRVHADPLSGLVFTNESILTICREGLIKIWVRPDQSENN
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggcgccggctgctccgggtgcgggtgcgggtgcggggggcggcgccgcggcg
gggctcaagacctacttcaagacgcccgaggggaggtacaagttgcagtacgagaagacg
cactccgccttgctgcattacagccacgggggaaagaccgtctcgcagttgacagtggcg
tacctgaaggagaagcctgctggccagggctccatgccgtcaacaccgagctccagcagt
gggatgcgatctgcggcagcaaggctgctgggcactgggaatggtagcagggcacatatc
tttgctggaagcaatggagtaagccgggctgtttctggaagcagccgtataggaggtggc
cttggtacatctacaggccttggtggaccacaaggggtggcaaattatgatggcaagggt
acatacatcatcttcaatgcagccgatacgctattcatcagtgatctcaattcccaggac
aaggatccaataaagtccatccatttcagcaactcgaacccattgtgccatgcattcaac
tcagaagccaaagaagggcatgacctgatcatcgggatgggatccggggatgtctattcg
atgtcgctgaggcaacagttacaagatcctggaaggaagcctgttgcggcccaacactat
aataagggtgataaagatgtaacgcccaatggaagccggtgcacatctattgcatgggtg
ccagagcgtgaaggcatttttgttgttagccattctgatggaaatctgtatgtgtatgat
aaaaacaaggatgggagcacagattgtacgtttccagctctgaaggatcaatcccaattc
acggtttctcatgctaagtcgagtaagagcaacccgattgctagatggcatatctgtcaa
ggttcgatcaatgccatttccttttcaccagatggcgcgtacttggcgactgttgggaga
gatggttatttgagagtttttgatttttcaaaggaacaactaatatttggggggagaagc
tattatggcgctctgctgtgctgcacgtggagctcggatggcaaatatctattaacaggt
ggtgaagatgatcttgtgcaggtatggagcatggatgacagaaagatagttgcatggggc
gaagggcataattcctgggttagtggagttgcttttgattcatattggtccccaccaagt
tctgatggaacaggagaaaatgtctatcgctttggttctgttggtcaggacacccaactg
cttctgtgggaccttgcactggatgagattgttgtcccgctacgtcatccttcaagttgc
tcgccaacatttagcagtgggagcccttctgcccattgggacaatgcatgccctccagca
ggtattctccaaccttctccaagaatgcaagatgtgccgaagctctcaccccttgtttcc
aaccgagtacatgccgatccactctctggtctggtgttcacgaatgaatcaattctcacc
atctgccgtgagggactcatcaaaatctgggtcagaccagaccagagtgaaaacaattaa
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