Phragmites australis (common reed): 133906128
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Entry
133906128 CDS
T10575
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133906128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133906128
03036 Chromosome and associated proteins [BR:
paua03036
]
133906128
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133906128
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133906128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
133906128
NCBI-ProteinID:
XP_062203904
LinkDB
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Position
23:complement(65933..72003)
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AA seq
898 aa
AA seq
DB search
MFGSTNPFGQSSTSPFGQTSFGTQQGFGQATTAANNPFAPKPFGSPTTTFGAQTGSSLFG
TTSTGAFGQQQSTPTFGTPSSSSPFGSSTPAFGASPTPAFGATSSSFGSGSLFGQKPSFG
GFGTSPSQSSPFGSTLQQTQPTFGSSTFGAATTPSFGTPTTPSFGTTTTPGFGSTSTSLF
GASSTPAFSSTAFGSSTPGFGSSGTTAFGASSTPGFGALSTPSFGTSTSAFSFGSSASFG
QTAASSGSSPFGTTPSPFGAQTSPFGSQTAAPTFGQAQFGNQAGGTRIKPYAQTPDVDSA
TSGTQPAAKMDSISAMPEYKDKSHEELRWEDYQRGDKGGPNPSGTPAAAPSFPSTQQNAF
TGAFGQATLNQFPSTATNNPFAAKPSTGFGSTSTSIFNSFNNASAASSSPFPSSSGSTLF
GQSSGSAFPSSSSPSLFPNTTPTFAPSSLFGTSSTNASPFSTSLSLANTPAVGLFQPSPA
FVQPPSSTPAFSSGSLFSTPNYGGLSGPSLFSTPTFQPSAPAQTSSMFSFQPPTQPAPTG
GFPGFSNTTNQAPIGQLTPGQSNMVMQPAPVSHPFGTLPALPQMTIGNARSSPSVQYGIS
SLPVAEKPLPSRTLSMVVPRHLSHRRIKLPPRKYNPISDGKVPFFADDEESPATPKADAF
FIPRENPRNLIIRPIDQWPSRSGIDRQLIPKDSADLEKSKGASSESERDETDMSPSRPSP
VENGNHREPKAVTQHGNGTSVERLMPKLPHADYFTEPSLEELAAKERAEPGYCCRVRDFV
VGRHGYGSIKFLGETDVRGLDLESIVEFNNREVIVYKDDSKKPPVGDGLNKAAEVTLLNI
KCMNKKTGEQYLEGPRVDKYKQMLVKKAEEQGAEFVSFDAAKGEWKFRVRHFSAYGFW
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccaccaacccattcgggcagtcatccacgagcccatttggccagacctca
tttggaacccagcagggattcggccaggctaccactgcagccaacaatcccttcgcacca
aaaccatttggcagcccaactaccactttcggggcacagactgggagctcactttttggc
actacatccactggcgcctttgggcagcagcaatccactcccacgtttggcaccccatcc
tcctcctctccgttcgggagctccacaccagctttcggtgcatcgcccacccctgccttt
ggtgccacatcctcctcctttggctctggatctttattcgggcaaaagccaagttttggg
ggttttggaacatctcctagccagtcgagtccttttggtagcacgctccagcaaacacag
ccaacatttggcagcagcacttttggtgcagcaactacaccatccttcggcaccccaact
acaccgtccttcggcaccacaactaccccaggatttggttcaacgtcaacatctttattt
ggtgcttccagcaccccggcgtttagttctacagcttttggttcgtccactcctggtttt
ggatcttcaggaacaacagcgtttggtgcgagcagtactccaggttttggagctttgagc
acgccttcatttggcacatcaactagtgcattcagttttggttcttcagcatcatttggg
caaacggcagcttcatctggtagctctccctttggcacaactccatcacctttcggcgca
cagacttctccctttggctcacagacagcagcgccaacttttgggcaagcacaatttggt
aaccaagctggaggaaccagaataaaaccttatgctcaaacaccagatgttgacagtgct
acaagtggtactcagcctgctgcaaaaatggattccatatcagcaatgcctgaatacaaa
gacaagagtcacgaagaattgaggtgggaagattaccagcgtggagataaaggtggacca
aatccttctggaactccagcagcggcgcctagctttccctctacacaacaaaatgctttt
accggtgcatttggccaagctactttaaaccaatttccatcgacagcaacaaacaatcca
tttgctgctaagccctcaactggctttggttctactagcacatcaatattcaattcgttt
aataatgcatcagctgcaagttcgagtccattcccatcgtccagtggtagcacactattt
ggacaatcaagtggttctgcatttccatcaagtagttcaccatctttgtttccaaatacc
actcctacttttgctccgtcttcgttatttggcacatcatcaacgaatgcaagtccattc
agcactagcttgtcgttggccaacactccggcagttgggctatttcaaccttccccagca
tttgtgcaaccgccatcaagtacaccagctttctcctctggaagcctattcagcacacct
aactatggcggtctgagtgggccttcacttttttcaacgccaacatttcaaccatctgcc
cctgctcaaacttcaagcatgttctccttccaacctccgactcagccagctcctacaggt
ggattccctggtttttccaacactacaaatcaggccccgattggacagctaactcctggc
cagtccaatatggtcatgcagcctgctcctgtttcgcatccatttgggacacttcctgca
ttgcctcagatgaccattggaaatgctagatcttctccttcggttcaatatggaatatca
agtttgccagttgcggagaagccacttcctagcagaacattatccatggtggttcctagg
catttgtcacatagaaggataaaattgcccccaagaaaatataatccaatatctgatggc
aaggttccattctttgctgatgatgaagaatctcctgcaacaccaaaagcggatgctttc
ttcatccctagagagaacccgaggaatctgataatccgtccaatcgatcagtggccttca
cggagtggaattgacaggcaactgattccaaaggattcagctgatttggaaaaatctaaa
ggtgcttcctcagaaagtgagcgtgatgagactgacatgtcaccaagcaggccttctcca
gtggaaaatggcaatcaccgcgagcccaaggctgtgactcaacatgggaacggtacttca
gttgagaggctgatgcctaagctcccacatgcagattacttcacggagcctagcctagag
gagcttgccgccaaggaacgtgctgagccaggctactgctgtcgggtgagggactttgtt
gttgggcgtcatggttacggcagcatcaagttcctgggggagacagatgtaaggggcctg
gatctggagtcaattgtggagttcaataaccgcgaggtgattgtgtacaaggacgatagc
aagaagcccccggtgggtgatgggctgaacaaagccgcagaggtgactcttctgaacatc
aagtgcatgaacaagaagactggtgagcagtaccttgagggtccgagggtggacaagtac
aagcagatgctggtgaagaaggctgaggagcagggcgctgagtttgtgtcttttgacgct
gccaagggagagtggaagttcagggtgaggcacttcagcgcctacgggttttggtga
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